KEGG   Oryza sativa japonica (Japanese rice): 4328144
Entry
4328144           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    4328144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4328144
Membrane trafficking [BR:osa04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    4328144
SSDB
Motif
Pfam: TPR_Vps8 Beta-prop_VPS8 VPS8_N WDR55 TPR_VPS8_2 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_EML Beta-prop_WDR36-Utp21_1st TPR_Vps41 ANAPC4_WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Clathrin Beta-prop_HPS5 Beta-prop_TEP1_2nd WD40 Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta zf_RING_Vps8 zf-RING_2 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd zf-RING_Vps41 Beta-prop_WDR19_1st EIF3I
Other DBs
NCBI-GeneID: 4328144
NCBI-ProteinID: XP_015626027
LinkDB
Position
2:join(1283725..1285152,1285388..1285681,1285771..1286025,1286142..1286274,1286363..1286502,1286589..1287222,1287516..1287580,1287660..1287761,1287958..1288100,1288699..1288754,1289152..1289807,1289913..1290103,1290218..1290512,1291020..1291307,1291410..1291519,1292247..1292577,1292906..1293307,1293564..1293798,1293901..1293926)
AA seq 1927 aa
MSTSSPAMAPPSQPPPPPPSQELDLDAFLPSSPTSSSVSEPDGDGAADHRRAVDDLLLLL
SSSDSDTDEPPARPSPIAQLKTLASIRAPAPSPKPSPSPSPSPRRSTSASPSATLSSLVS
RTFSNNAASSSSSKPLPSLFRGVRPSPKPGAALAAAAAASRAVLTPHAAAIKSRRSASAP
IEKLLDEGSGSEVSEEFPSAGNSEAGVAEKTNAEGNADVSKEATSGSGDEELEADKHGEE
VRFEEKTEPTESVEEVAADSAVAENINEHKQLGGESLAETDRPADQIGLDDEEHVDDRTA
DENLVEFGDVEDLVGAACEEDVDDEQESERSETSVEEHSESESIIDKAIEERLEISRKTE
KIVEKRPKLSMKPLEQAEELEKRQASFGQHWEEGAAAQPMHLEGIGRGQPAIGYMQIEVD
NPITRAMSSQSFGQDHGSPQVMTVHKSYIALGMSKGSVIVIPSKYSIHQADDTDAKMLFF
WNQGEKTQSSVTAMCFNQQGDLLLVGYNDGHMTIWDVQKGTAAKVIYGEHTAPVVHACFI
RQSKAITGDSKGLVLLHTFSIIPVINRLTIKGTQRLFDGNTGIVLSACPLLVDESFGSSN
SSTQGNLTTSSGGGLSSMMGGVVGGVVGVDSGWKFFNEGSSPIEDGVVVMFIMHQHALVV
RLRTNIDHVDHIETFSRPDGAREGSIAYAAWKYTTSSSDSPSIVEEQVSWLALAWDRQVQ
VAKFVKSKMIKHKEWKIDSAAIGVAWLDDQMLVVLNLRGQLCLFSKDSNELRRTVFVLDG
YIFDESILYHTHFSNRFGNPEKHFNNSVAVRGATVYILGPNFLTVSRLLPWKERIEALKR
AGDWMGALDMAMKLYDGQTQGVVDLPRTVDSIREAIMPYLVELLLSYIHYVFEYISIALS
SHTGKGGASDGLVDADRSLLTQREEQYARVGGVAVEFCVHIGRNDILFDTVFSKFVAAKS
GGMFLEVLEPYILKDMLGSLPPEIMQALVEHYSSKGWLQRVEQCILHMDISSLDFNQVVR
LCREHGLYGALIYLFNQGLKDFRTPLEELLSVIQNASRKEGASTCYRMLVYLKYCFQGLA
FPPGHGTIPQSRLHSVREELLQFLLEESKTSSTDVYKSFKSSSEKCPNICYLLWMDTEAA
LEVLKCAFAHERFEPRDNPSSTPDARVSEDGDNINIGSPDSENIMLQNVVDTIVDIVGLE
NEAIHSIVIGAAESEIWPSEKDFGYLIEFVSFFVSHKRAKASQRVVRHILRYLTSSNILS
SDDKKTPTQKEKEVLQLFDAVPQTDWNSDYVLHICLDAHFHQACGLIYMTRKQNLPALES
YMKDTLEPFHAFIFINKKLSELADYEASSFRSSVISHFPELVKLSRECAFVLVIDHFHDE
IQKILSELHSDHHSLFLFLKTAIEVHLSGKLNFSELNARKNSTVELQYSSRELEFYIQRL
SNLPKLLDRNPVIMTDEIVELYLELLCQYERRSVLKFLETFDSYRLERCLHLCLDYGVTD
AAAFLQERVGDVGSALALILAGLDEKINLFISSVENAFSGIASKSISEIEQPDIVLKMSE
AHPVLDALRAAIGLCQRNSQRLNPEESQSLWFQLLDSFSEPLKKLYGSKDVNGKGVRSNG
SETSNRQPKDKGFSRKTRISAYQRCLNALRRVFSQFVGEIIEAMAGHIPLPAIMGKLLSD
NRSQEFGDFKLVIHRMLSMYLYEKRILETAKSVIEDDSFYTLSLLKRGVCHGLAPQTFVC
CICNCSLSKESAVSAIRVFSCGHATHLQCESEQSKSSNRDSKDGCPICLSTSNTQAQNKS
PISENGLGKHFGAESEVSHGTYHTHETDHVDRSRGLQQMSRYEILNHLQRPQSLHIETVP
PLRLSPPAIYHEKIQKRTTTMGESSKHSVRTEKPQRIWQMKEPRSKRSGNRVLPKSSMLS
SQNNQVR
NT seq 5784 nt   +upstreamnt  +downstreamnt
atgtcgacgtcatcgccggcgatggcgccgccgtcccaacctccgccgccaccgccgtcg
caggagctcgacctagacgccttcctcccctcctcccccacctcctcctcagtctcggaa
cccgatggcgacggcgccgccgatcaccgccgcgccgtcgacgacctcctcctcctcctc
tcctcctccgactccgacaccgacgagccgcccgctcgacctagccccatcgcccagctc
aaaaccctagccagcatccgagccccagctccgtcccctaaaccttcgccttccccatcc
ccttcgcccaggagatccacatccgcctcgccgtcggcgacgctctcctccctcgtctcg
agaaccttctcgaacaacgccgcttcgtcttcctcgtcgaagcctctcccttcgctcttc
cgcggcgtccggcccagccccaagcccggcgctgctctcgccgccgccgccgccgcgtcc
cgcgctgtcctcaccccccatgccgctgccatcaagtcccggcgttccgcctccgcgccc
atcgagaagcttctagacgaaggctccggttccgaagtctctgaggagtttccttccgct
ggaaattcggaagcgggagtagcggagaagactaatgcggaagggaatgcggatgtgagc
aaggaagctaccagtgggagtggtgatgaagaattggaagcggacaaacatggagaagag
gtgcggttcgaagaaaaaactgagcccactgagtcggtggaagaagttgctgctgattct
gctgttgccgagaatatcaacgagcataagcaacttggaggtgaaagtttggcagaaact
gatcgacctgcggatcaaattggtctcgatgatgaggaacatgtagatgaccgaaccgcc
gatgaaaatttagtagaatttggtgatgttgaggatctggttggggctgcttgcgaggaa
gatgttgatgatgagcaggaatctgaaagatccgaaacctctgtggaagagcattcggaa
tctgagagcattattgataaggcaatcgaagagaggttggagattagcaggaaaactgag
aagattgtggagaaaaggcctaagttgtcaatgaaaccactggagcaggcggaggagctt
gagaagaggcaggcttctttcgggcagcactgggaggaaggagcagcagcacaacccatg
catctggaggggattggaaggggccaaccagctattggttacatgcaaattgaggttgac
aaccctataactcgtgccatgtcctcccagtcatttggacaggaccatggctctccccag
gtgatgacagttcataagagctatatagcattgggaatgtctaaaggatctgtcattgtt
ataccaagcaaatattccatccaccaagctgacgatacagatgcaaagatgcttttcttt
tggaaccaaggtgagaaaactcaatcatcggtgactgccatgtgcttcaaccaacaaggt
gatcttcttctagtaggatacaatgatggccatatgacaatctgggatgtacagaaaggt
acagctgcaaaagttatatatggtgagcacacagcacccgtagtgcatgcttgctttatc
cgccaatctaaagccatcactggtgattcaaaagggctagtgctgttgcacacattttcc
attattccagtaatcaatcgcttgaccatcaagggaacccagcgcctttttgacggaaac
accggaattgtgctctcagcctgtcctcttctagtggatgaatcatttggttctagcaac
tcttctacccagggaaacctgacaacctcgtctggtggtggtcttagcagcatgatggga
ggtgttgttggaggtgtagttggagttgattctgggtggaagtttttcaatgaaggttct
tctccaatagaggatggtgtagtagtcatgtttattatgcaccaacatgctcttgtggtt
aggctccgtaccaatattgatcatgttgaccatattgaaaccttctctagaccagatgga
gcacgggagggttccattgcatatgctgcatggaaatacacaacatcctcgagtgattca
ccatcaattgttgaagaacaagtatcatggcttgcacttgcatgggatcgtcaagttcaa
gtggcaaagtttgttaaatcaaagatgattaaacataaagaatggaagattgatagtgca
gcgattggtgttgcctggttagatgatcaaatgttggttgtacttaatttgcgagggcag
ctctgtttgttctccaaagatagcaatgagcttcgcaggactgtatttgttcttgatggt
tatatcttcgatgaaagcatactataccatacacatttttctaacaggtttggcaacccg
gagaagcattttaacaattcggtagcagtaagaggtgctacggtgtatattcttgggcca
aatttcctcacagtttcccgacttcttccatggaaggagcggattgaagcactaaagaga
gctggtgattggatgggtgcactggacatggctatgaaactttatgatggccagacacag
ggtgttgttgatctcccgagaacagttgattctatacgagaagccataatgccatattta
gtagagttgctgctgtcatatatacattatgtatttgaatacatttcaattgctttgtca
agccatactggaaaagggggtgcatcagatggcctggtagatgctgataggtccctgctg
acacagagagaggaacagtatgcacgtgtagggggggttgcagttgagttttgtgttcat
attggacgaaatgacatccttttcgacacagtcttttctaagtttgttgcggcaaaaagt
ggaggtatgtttctggaggtgctagagccctatatattgaaggatatgcttggctctttg
ccacctgagattatgcaagcactagtagagcattatagtagcaaaggatggttgcagcga
gttgaacaatgcattcttcatatggatatttcttcattggattttaatcaggtagtccga
ctgtgtcgtgaacatgggttgtatggtgcactaatttatttgttcaaccaaggtctgaaa
gatttccgcacacctctagaggagcttttatctgtcattcagaacgctagtagaaaagaa
ggtgcttctacttgctacaggatgcttgtttacctgaagtattgctttcagggcttagca
tttcctccagggcacgggacaattccccaatcccgccttcattcagtacgagaagaacta
ttgcaatttttgcttgaggagtctaagacttccagtactgatgtatacaagagcttcaaa
tcctccagtgaaaaatgcccaaacatatgctatctactatggatggatactgaagctgct
ttggaagttctcaaatgtgcctttgcacatgagagatttgaacctagagacaacccatct
agtactcctgatgcacgtgtctcagaggatggagacaatattaatattggaagccctgac
agtgaaaatattatgttacaaaatgtggtggacaccattgtggatattgttggtttggaa
aatgaggctattcactcaattgttattggagcggctgagtcagaaatttggccttcagag
aaggactttggttatctaatcgagtttgtgtctttttttgtttcccacaaaagggcaaaa
gcatctcaaagagttgttaggcacatcctcagatatcttacttcatccaatatcctgtca
tctgatgataagaaaacaccaactcaaaaagaaaaggaagttcttcagctcttcgatgca
gttcctcaaactgattggaattctgattatgtgttgcatatttgcttagacgctcatttt
caccaggcttgtggattgatatatatgaccagaaagcaaaatttgcctgctttagaaagt
tacatgaaggatacactggaaccattccatgcttttatcttcattaacaaaaagctatcc
gaattggccgattatgaagcttcgtcatttcgttcctcagtaatatctcattttcctgag
ctagtcaagctaagcagggagtgcgcttttgtcttggtcattgatcatttccacgatgag
atccagaaaatattatcagagcttcattctgatcaccacagcctctttcttttcttgaaa
actgcgattgaagtgcacttgtcaggaaaactgaatttcagtgaactcaatgccagaaaa
aatagcacagttgaacttcaatactcatcccgtgaacttgaattttatatacagagactt
tcaaatcttcccaagttgttggaccgcaatcctgttattatgactgatgagattgttgaa
ctctatctggagcttctatgtcagtacgagcgaaggtctgttttgaagtttctggagact
tttgacagttacagattggagcggtgtttgcatctttgtttagattatggggttacagat
gctgctgcattcttgcaagagagagttggtgatgttgggagtgcactggcacttattcta
gcaggtcttgatgagaaaatcaacctatttatttcttcagtggaaaatgctttctctggg
attgcatcaaaaagtatatctgagatagagcagccagacattgttctaaaaatgagtgag
gctcatcctgtgcttgatgcattacgtgctgccatcggattgtgtcaaaggaattcacaa
agattgaacccagaggagtcccagtccctttggttccaactgcttgactccttctcagag
cccctgaaaaaattgtatggaagcaaggatgtaaatggaaaaggtgtcaggtctaatggg
agtgaaacatcgaatagacagccaaaggacaaaggattctcacgaaaaacaaggatttca
gcttatcagaggtgcttgaatgcactgcggagagtattttcgcagtttgttggagaaata
atcgaggcaatggctggacatatacccttaccagcaatcatgggaaagctattatctgac
aacaggagtcaagagtttggtgattttaagctcgttatacatagaatgctgtctatgtat
ctttatgaaaaaagaatactggaaacagccaagtcagtaattgaggatgattcattctac
accttgagcttactaaagagaggggtttgccatggacttgctccacagacttttgtatgt
tgcatatgcaactgctctctttcaaaagaaagtgctgtttcagcaatacgagtattcagt
tgtggacatgcaactcatctccaatgtgagtctgaacaaagtaagtcatccaatagggat
tccaaagatggatgcccaatttgtctttcaactagtaatacacaagcccaaaacaaatca
cctatatcagagaatgggcttgggaaacattttggggctgaaagcgaggtatcacatggc
acctatcatactcatgaaacagatcatgtcgacagatctcgtgggcttcagcagatgtca
cggtatgaaatactgaatcatcttcagaggccacagagtttgcatatagaaactgtacct
ccattgaggctttcaccaccagcgatatatcatgaaaagatacagaagagaacaaccacg
atgggagaatccagcaagcattcagttagaactgaaaaaccccagagaatatggcaaatg
aaggaaccaagatcaaaaagatcagggaaccgagttctgccaaagtcaagcatgttgagt
tctcagaataatcaagtgcgatag

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