Oryza sativa japonica (Japanese rice) (RefSeq): 4328152
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Entry
4328152 CDS
T01015
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03022
Basal transcription factors
osa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
4328152
09124 Replication and repair
03420 Nucleotide excision repair
4328152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4328152
03400 DNA repair and recombination proteins [BR:
osa03400
]
4328152
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
4328152
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
4328152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
4328152
NCBI-ProteinID:
XP_015626158
UniProt:
Q6Z2N2
A0A0P0VE55
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All DBs
Position
2:complement(1347132..1351358)
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AA seq
289 aa
AA seq
DB search
MASSKLYSDDVSLAVVVVDTNPLFWATAALPFADFFAHLIHYVNSLLLLNHLNHVVVIAA
GLSSCTYIFDSSDASASGAADVAATFAKASRKMDEFIAEDARATSSNGSVADGNAASLLS
GALSLALCYIQRVFRSGTRHPQPRILCLQGSPDGPEQYVAVMNSIFSAQRSMVPIDSCIV
GTQDSAFLQQASYITGGVYLKPQELNGLFQYLAAVFATDLHSRTFLRLPKTLGVDFRASC
FCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSEFNRVMPDLNSVPDQRQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctccaagctctactccgatgacgtcagcctcgccgtcgtcgtcgtcgacacc
aaccccttgttctgggccaccgccgccctccccttcgccgacttcttcgcccatctgatc
cactacgtgaactcgctcttgcttctgaaccacctcaaccatgtggtcgtcatcgccgcg
gggcttagctcttgcacctacatcttcgactcgagcgatgctagtgcctctggtgctgca
gacgtcgcggccaccttcgcaaaggcgagccgcaagatggatgagttcattgcagaagac
gcccgtgccactagcagcaatggttccgttgctgatggcaatgcagcctctcttctctca
ggcgcactgtcccttgctctgtgctatatacagagggtttttcggtctggtactcgacat
ccacaacctcggattttatgcctgcagggttctccagatggacctgaacaatatgtagcg
gtcatgaactcaatattttctgctcaacgttccatggtcccaatcgattcatgcatagta
ggaacccaagactctgctttcttgcaacaggcttcatatataacaggtggagtttatttg
aaaccccaagaactaaatggtctatttcaataccttgctgctgtatttgcaactgattta
cactcaagaacctttctgcgcctccccaagactctgggagtggatttccgtgcttcatgt
ttctgccataagaagactattgacatgggatatgtttgttcagtttgtttatcgatattc
tgcaagtatcataagaagtgttcgacctgtgggtcagaattcaaccgtgtcatgcccgac
ttaaattctgtacctgatcaaaggcagtag
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