Oryza sativa japonica (Japanese rice): 4328179
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Entry
4328179 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4328179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4328179
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4328179
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
4328179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_6
Zn_ribbon_6
zf-RING_4
YEATS
Motif
Other DBs
NCBI-GeneID:
4328179
NCBI-ProteinID:
XP_015623254
UniProt:
A3A2R2
Q6Z6Z3
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All DBs
Position
2:complement(join(1488540..1488860,1489112..1489498,1490499..1490717))
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AA seq
308 aa
AA seq
DB search
MAPGSSIVTDIPESDCVSDGLSEALTGIRLDGDSTCKPWSTSLVTVELSSLTGLNDLLEC
PVCTNSMRPPILQCPNGHTICSNCKHRVENHCPTCRQELGNIRCLALEKVAESLQLPCKY
QSLGCAEIHPYQNKLKHEELCRFRPYSCPYAGSECLIAGDVPMLVSHLINDHKVDLHEGC
TFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGMAPVYMAFLRFMGEDSEAR
NFCYSLEVGGNGRKLTWQGIPRSIRDSHKKVRDSFDGLIIHRNMALFFSGGNRQELKLRV
TGRIWKEQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggccccaggaagcagcattgtgaccgatatccctgagtcggattgtgtatctgatggg
ctctctgaggcactcactggcattaggcttgatggagattctacatgcaagccctggtct
acatcacttgtcacagttgagctatcatcgctgacgggcttgaatgatttgctcgagtgt
ccagtctgcacaaactcaatgcgcccacctatactgcagtgcccaaatggtcacacaata
tgctctaactgcaagcatagggtggagaatcattgccctacttgtcgccaagaactgggt
aatatcagatgtttggctcttgagaaggtggctgagtcacttcagcttccatgcaaatat
caaagcctaggctgtgctgagattcatccttaccaaaacaaacttaagcatgaggagctc
tgcaggttcaggccatatagttgtccatatgcaggttcagaatgcctgattgctggcgat
gttccgatgcttgtctctcatctcataaacgaccataaggtggacttgcatgaaggctgc
acctttaaccaccgttatgtgaagtccaacccttatgaagtggaaaacgctacatggatg
ctgacggttttcaagtgttttggacagcacttctgcctgcattttgaggcattcctgctg
gggatggcaccagtgtacatggcgttcctgaggttcatgggcgaggacagcgaggcccgg
aacttctgctacagcctggaggtgggcgggaacgggcggaagctgacatggcagggcatc
ccccggagcatcagggacagccacaagaaggtccgggacagcttcgacggcctcatcatc
caccggaacatggccctcttcttctccggcggcaacaggcaggagctcaagctgcgggtt
accggccgcatctggaaggagcaatga
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