Oryza sativa japonica (Japanese rice): 4328188
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Entry
4328188 CDS
T01015
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX2
KO
K08681
pyridoxal 5'-phosphate synthase pdxT subunit [EC:
4.3.3.6
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00750
Vitamin B6 metabolism
osa01100
Metabolic pathways
osa01240
Biosynthesis of cofactors
Module
osa_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
4328188
Enzymes [BR:
osa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
4328188
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Motif
Pfam:
SNO
GATase_3
DJ-1_PfpI
Peptidase_S51
BPL_N
GATase
Motif
Other DBs
NCBI-GeneID:
4328188
NCBI-ProteinID:
XP_015623150
UniProt:
A3A2S3
Q6Z6Y1
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Position
2:complement(join(1573487..1573619,1573710..1573807,1574586..1574777,1574888..1574961,1575030..1575117,1576249..1576376,1576480..1576534))
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AA seq
255 aa
AA seq
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MAVVGVLALQGSFNEHLAALRRIGVRGVEVRKPEQLQGLDSLIIPGGESTTMAKLANYHN
LFPALREFVGTGRPVWGTCAGLIFLANKAVGQKSGGQELIGGLDCTVHRNFFGSQLQSFE
TELSVPMLAEKEGGSDTCRGVFIRAPAILDVGSNVEVLADCPVPSDRPSITIASGEGVEE
EVYSKDRVIVAVRQGNILATAFHPELTSDSRWHRFFLDMDKESDTKAFSALSLSSSSRDT
QDGSKNKPLDLPIFE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgtcggcgtcctcgcgctgcagggctccttcaacgagcacttggccgcgctg
aggaggatcggggtgaggggggtggaggtgcggaagccggagcagctgcaggggctcgac
tcgctcatcatccccggcggcgagagcaccaccatggccaaactcgccaactaccacaac
ctgtttcctgcacttcgagaatttgttggtacaggaaggcctgtctggggaacttgtgct
ggactcatcttcctagctaacaaggcagtaggccaaaaatccggaggtcaggagcttatt
ggaggactagattgtactgtccaccggaacttttttgggagccagcttcaaagctttgaa
acggaactttcagtgccaatgcttgcagagaaggaaggagggagcgatacatgccgtggc
gtatttatacgagcacctgctatcttggatgtaggttcaaatgttgaagtactggcggat
tgtcctgttccatcggatagacccagtattacaatagcgtctggagagggtgttgaggaa
gaagtgtactcgaaagatcgggtaattgttgctgtaaggcaagggaacatcctcgctact
gcttttcacccagaattgacatcagactctagatggcatcggttcttcctggacatggat
aaagaatctgatacaaaagccttctctgctctctctctctcatcatcttcaagagacact
caagatgggtcaaagaataagcctcttgatctacccatcttcgagtag
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