KEGG   Oryza sativa japonica (Japanese rice): 4328210
Entry
4328210           CDS       T01015                                 
Name
(RefSeq) structural maintenance of chromosomes protein 3
  KO
K06669  structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4328210
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:osa00535]
    4328210
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    4328210
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    4328210
Proteoglycans [BR:osa00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   4328210
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_21 AAA_15 MscS_porin DUF489 AAA_29
Other DBs
NCBI-GeneID: 4328210
NCBI-ProteinID: XP_066163481
LinkDB
Position
2:complement(join(1762477..1762667,1762802..1762976,1763174..1763269,1763726..1763872,1763959..1764127,1764277..1764428,1764514..1764584,1764680..1764863,1764948..1765139,1765280..1765427,1766062..1766215,1766298..1766385,1766979..1767180,1767280..1767416,1767785..1767884,1767966..1768138,1768413..1768557,1768634..1768755,1768841..1769086,1769578..1769753,1769837..1769954,1770025..1770103,1770188..1770267,1770837..1770908,1770998..1771065,1771166..1771204,1771444..1771519,1771608..1771622))
AA seq 1204 aa
MYIKKVVIEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVLSDMFQNLRSED
RGALLHEGAGHSVVSAFVEIVFDNSDNRIPVDKEEVRLRRTVASKKDEYYLDGKHVSKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEDRRRESLKIMQ
ETANKRKQIDQVVHYLEERLRELDEEKEELKKYQQLDKQRRSLEYTILDHELNEARNELA
SMDDNRRKISERMSHADNEVVDVREKVKTFDKEIKYSTKGINDTKAQKEGVEKKRTEALK
VVAQIELDLRDIKDRILNEKRAKDEAAKDLQSVRMESEKSKSELAEISKVHQAKLKEEEE
ISKSIMDREKRLSILYQKQGRATQFANKAARDKWLQKEIDDLERVLLSNRKQEGLLQEEI
QKLKDEINNLNSYIESRKSESSKLESALAKKHNDYNDLRKQRDELQEERKSFWKEEADVT
AEIDRLKDDLVKAQKSLDHATPGDIRRGLNSVSRIIRDHGITGVFGPVLELVDCEEKFFT
AVEVTAGNSLFHVVVENDDISTRIIQVLTREKGGRVTFIPLNRVKVPDVSCPQSPDFVPL
LKKLKYRADHRRAFEQVFGRTVICRDLETATKVARGNGLDCITLDGDQVARKGGMTGGFY
DSRRSKLKFVKIIRDNKTAIEKKAAHLENVGSKLRDIDKKITDLVTKQQQMDAERDHAKS
ELEQFKVDIASAMKQMVSLDKALGKKEKSLDNIRNQIEQIQSGIAMKNDEMGTELIDQLT
SEERDLLSRLNPEITELKEKFLLCKNSRIEIETRKEELETNLSTNLMRRQKELEAIISSA
DSKTLPLEAESKEQELKSSKRSLDELTAMLKANVDAINNFTRKMEELKRQRDDLKALEAN
LEQTVQDGAKDLEQLMSSRSMHLAKQEECMKKIRDLGSLPADAFETYKRKNKKQLQKMLY
DCNEQLQQFSHVNKKALDQYVNFTEQREQLQRRRAELDAGDQKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMRKKDGDADDDDNDEDGPREPDPEGRIEKYIGV
KVKVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMADTQFIATTFRPEIAKVADKIYGVTHKNRVSYINVVSKEQALDFIEHDQT
HNAS
NT seq 3615 nt   +upstreamnt  +downstreamnt
atgtatataaagaaagttgtgatagaaggatttaagagctacagggaggagatctcaaca
gaacctttcagccccaaagttaatgtagttgttggggcaaatggatctggcaaatcaaat
ttcttccatgctatacggtttgtcctcagtgacatgtttcaaaacctgcgcagtgaagac
aggggcgctcttcttcatgaaggtgctggtcactcggttgtctcggcttttgttgagata
gtgtttgataattcagacaaccgtattccagttgacaaagaggaggtacgcctgcgcagg
acagttgcttcaaagaaggatgaatactacttggatgggaagcatgttagtaaaactgaa
gtcatgaatctgctagagagtgctggattttctcgctctaatccatactacgttgtccag
cagggaaagattgcatcccttaccctaatgaaagattccgaacggctggatctcctcaaa
gagatcggtggtacgcgcgtttatgaagatagacgacgcgagagtttgaaaatcatgcag
gaaacagccaacaaaagaaagcagattgatcaagttgtccactacttggaggaaaggttg
agagaacttgatgaagagaaagaagaactgaagaagtaccagcagctggacaaacaaaga
agatcacttgagtataccatactggaccatgaactaaatgaggctaggaacgaattagct
tcgatggatgataaccgaagaaaaatttctgaaagaatgtcccatgcggataatgaagtg
gtagatgtacgtgagaaggtgaagacttttgacaaagaaataaaatactcaactaagggg
ataaatgataccaaggctcaaaaggaaggtgtagagaagaagcgtacagaagcactgaag
gtagttgctcagattgagcttgatttgagagacataaaagacagaatcttgaacgagaaa
cgggcaaaggatgaagctgcgaaggatttacaaagcgtgaggatggagagtgaaaagtca
aagtccgaattagctgaaattagtaaggtgcatcaagccaaattaaaggaagaggaagaa
atatcaaaaagcataatggaccgtgagaagcggttaagtatattgtaccaaaagcagggg
agggcaacccaattcgcaaacaaagctgccagagataagtggcttcaaaaggaaattgat
gatcttgagcgtgtgcttttatcaaatcgaaagcaggaaggtttacttcaagaagaaatc
cagaagcttaaagatgaaatcaataacttgaatagctacattgagtcccggaaaagtgaa
tcaagcaaattagagtctgcactagcaaagaaacacaatgactacaatgacttgaggaag
cagagagatgagcttcaagaagaaaggaaatcattttggaaggaggaagctgatgtgaca
gctgaaattgataggctaaaggatgatcttgtgaaggcacaaaagagtttggaccatgca
acacctggggatatcagaagaggcttgaattctgttagcagaatcatcagggaccatggt
attacaggagtttttggtcctgttttagagctggttgattgtgaagagaagttcttcact
gctgttgaggtcactgcagggaacagtttgttccatgtggttgttgagaatgacgatata
tcaacaagaatcattcaagtattgactcgagaaaaaggtgggcgggtgacttttatacca
ctgaatagagtgaaagttccagatgttagttgcccccaaagtcccgatttcgttccattg
ttgaagaaactaaaatatcgggccgatcatcgccgtgcctttgaacaggtttttggcaga
acagtaatatgccgagacctggaaactgcgaccaaagttgcacgcggcaatgggctggat
tgcatcacacttgatggtgatcaagttgccagaaaaggtggcatgacaggaggtttctat
gactctagacgctcaaaactgaagtttgtgaaaataattagggacaataaaactgcaatt
gagaaaaaggcagcacatctagagaatgtgggaagcaagctaagagatatagataagaaa
attacagatttagttaccaaacagcagcaaatggatgctgagcgtgaccatgccaaatca
gagttggaacaatttaaggttgacatcgctagcgctatgaagcaaatggtatcacttgac
aaggcacttggaaagaaggaaaaatcacttgacaacatccggaaccaaattgagcaaatc
caatctggcattgcaatgaaaaatgatgaaatgggcactgaacttattgatcagttaact
tcagaagaacgagatcttctttcacgattgaaccctgaaattactgaactaaaggagaag
tttctcttatgtaaaaacagtcgcatcgagattgaaacaaggaaagaagaactggaaacc
aatctatcaactaatcttatgaggcgccagaaagagcttgaagcaataatttcatctgca
gactctaagaccttgcctcttgaagctgaatcgaaagagcaagaactaaaaagttcgaag
aggagtcttgatgaattgactgcaatgttgaaggctaatgtcgatgctattaataacttc
acaaggaagatggaggaactgaaaagacagagagatgatctgaaggcactagaagctaac
ctggagcagaccgtacaagatggtgccaaggatttggaacagctcatgagcagcaggagc
atgcatttagctaagcaagaggagtgtatgaagaagatccgagacttgggctcattgcct
gcagatgcttttgaaacgtacaagcggaaaaataagaagcagctgcagaagatgctttat
gactgcaatgagcaattgcagcagttcagtcatgtcaacaaaaaagctcttgaccagtat
gttaacttcaccgaacaacgtgaacaactacagagaagacgggctgaacttgatgctggt
gatcagaaaatcagagaactaatatcagttttagaccaaaggaaggacgaatcaatcgaa
cgtacatttaaaggtgttgcaaggcacttccgtgaagtgttctctgaactagtgcaaggt
ggccatggacatttggttatgatgaggaaaaaggatggtgatgcagatgatgatgataat
gatgaggatgggcctcgtgaaccagatcctgaagggagaattgagaagtacattggtgta
aaagtcaaggtttcctttactggcaagggagaaacacagtctatgaaacagttgtctggt
ggacagaagacagtggtggcattgacactgatttttgccattcagcgttgtgatccagcc
ccattctatctgtttgatgagatcgatgctgctctggatccacagtacagaacagctgtc
ggcaatatgatccgccgtctagctgacatggctgacactcagtttatagcaacgacattc
cgaccagaaattgcaaaagttgctgataagatctatggtgtgacgcacaagaacagggtt
agctacatcaatgtggtgtcaaaggagcaagctctggacttcattgagcatgaccagaca
cacaacgctagctga

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