KEGG   Oryza sativa japonica (Japanese rice): 4328386
Entry
4328386           CDS       T01015                                 
Name
(RefSeq) TATA-binding protein-associated factor BTAF1
  KO
K15192  TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osa03021]
    4328386
Transcription machinery [BR:osa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     4328386
SSDB
Motif
Pfam: DUF3535 SNF2-rel_dom HEAT Helicase_C HEAT_EF3_N HEAT_EZ TOR1L1_N TPR_Trm732_C HEAT_ECM29 HEAT_2 Adaptin_N CLASP_N ARM_ECM29
Other DBs
NCBI-GeneID: 4328386
NCBI-ProteinID: XP_025879020
LinkDB
Position
2:join(3313881..3313929,3314165..3314259,3315246..3315463,3315574..3315631,3316220..3316301,3316504..3316835,3317236..3317344,3317428..3318007,3318101..3318233,3318339..3318407,3318643..3318854,3319113..3319350,3319687..3319845,3319960..3320385,3320469..3320906,3321052..3321171,3321243..3321725,3321930..3322468,3322637..3323126,3323295..3323363,3324194..3324298,3324399..3324617,3324713..3324967,3325061..3325110,3325634..3325743,3325831..3325913,3326019..3326231,3326329..3326499)
AA seq 2034 aa
MAQSSSRLHRLLTLLDTGSTQATRFAAARQIGEIAKSHPQELNVLLKKVSPYLRSKNWDT
RVAAAHAIGAIAENVKHTSVKDLFASAEAEKHASGLSGIGDVGSTLRHADTTATSELAFG
SFDINRVLEFGSPLLASGGQEYDIANDNGKNPAERLARQKQNLRRRLGLDVCEQFMDFND
VIKDEDLLAQKNYWGANMQNNGFYSFNTGQNIQHLVASMVPRYPKHSNFRSRRLSARELN
MLKRKAKSNAKDHTKAVPEDDDVVPKSSGPSNGASSDQDTVDAITDEDNLEYSENGRWPF
QQFVDQLIHDMFDPIWEVRHGTIMALREILTHQGACAGVYFPDLNSPFADLDDKNNLDSL
KRAHGIDLNEDIDSGQLEPVLKRQKKEESNPEVMDIQLDKEPSNGDYSKTEASLSTEPTV
SSGEPNLAHAKVESPFQVDGSANPSKVDPYCTPPHETLNSMPKLSSTHLPENSKFIKLMK
LANYSAVKNWEFLQDCAIRFLCVLSLDRFGDYVSDQVVAPVRETCAQALGAVLKYMHPTL
VCHTLNILLQMQRRQEWEVRHGSLLGIKYLVAVRQEMLKDLLNYVLHACKAGLEDPDDDV
RAVAAEALIPAAASLVRLNDQMLHSIVMLLWDILLDLDDLSPSTSSVMNLLAEIYSQPEM
VPKMLGTTAIGGDNEFDLNSVTLVAGEEKMGSNDNPYVLAALTPRLWPFMRHSITSVRRS
AVRTLERLLEVGNTRNSAKLWLASILGDALQVVFQNLLLESNDEIIRSSERAWKLLLQCP
TEDLESAASSYFSNWVQLATTPYGTALDSAKMFLPVALPRGSRSRAAAKIKSARLEHENT
RMISFGSTGENTSQEKHSEASLSVSKIIVGSDSDKSVTHTRVLTSMALGLFASKLPEGSW
QVVLGPLASDLMSLSGVQRQVASMVIVSWFKDLRKSDPAAVGTLLAFLSSLKGWMLDLLA
CSDPSFPTKDSPLPYAELARTYRKMRNEANNLFQSIESCALLKEYTSNLNFEADMLSVDD
AINFTSKLLLPSEPDFSLDSDKIVLNNIESAKQGLLSTSGYLKCVQNNLHVTVSSLVASA
VVWMAGLPSKLNPVILPLMAAVKREQEEILQDKAADALAELIFSCVGRKPGPNDKLTKNL
CTLTCTDASETPQAAVINSIQVIEDQNLLSIGKRFSNHKSRGQMTSGGESKSEGFISRRG
SELAFKHLCEKFGASLFEKLPKLWDCLTEFLKPVKTGDDLMKEDPSIAQLGRSCEDKEPQ
SLINNIQVVRSVTPHLAEPLRPQLLSLLPCILGCVRHPHVAVRLAAARCITSMAKSLTAN
VMVIVIENVIPMLSDSSSVCARQGAGMLLSLLVQGLAVELVPYAPFLVVPLLRCMSDPDG
SVRQTVTHSFAALVPLLPLAKGSLLPDGLSERLSSSAEDAQFLEQLLDNSQIDDYKLSID
LSVELRRYQQEGINWLAFLRRFKLHGILCDDMGLGKTLQASAIVAADIAESRARNDEQDP
KSLIICPSTLVAHWEYEIEKYIDSSIMKPLQYIGSSQDRIILRSQFDKFNVIITSYDIIR
KDIDFLENVFWNYCVLDEGHIIKNSRSKITSAVKQLKAQHRLILSGTPIQNNVLELWSLF
DFLMPGFLGTEKQFQATYGKPLLAAKDPKCSAKDAEAGILAMEALHKQVMPFLLRRTKDE
VLSDLPEKIIQDRYCNLSLLQLKLYDKFSNSNAKQEISTIVKENELDQSTSQPKATRHVF
QALQYLLKLCSHPLLVTGESPPDYLVDLLKEIGMGTGDELHDLHHSPKLVALQEILQECG
IGSEISSPDASAAIGQHRVLIFAQHKALLDIIEKDLFQSHMRSVTYLRLDGSVEPEKRFE
IVKAFNSDPTIDVLLLTTHVGGLGLNLTSADTLVFMEHDWNPMKDLQAMDRAHRLGQRKV
VNVHRLIMRGTLEEKVMSLQRFKVSVANAVINAENASLKTMNTDQLLDLFASTPASRKAS
VLPSSSGGDQSKDSKGKSGGKGLKSILNGLDELWDQSQYADEYDLNQFLAKLNG
NT seq 6105 nt   +upstreamnt  +downstreamnt
atggcacagagttcgtcccggcttcaccgcctgctcacattgctagacactggttccacg
caagcgacaaggttcgctgctgcacggcaaattggagaaattgccaagtcccacccccag
gagctaaatgtcttactcaaaaaggtttctccatatttacgtagtaagaattgggacaca
agggtcgcagcagcccatgcgattggtgccatagcagagaacgtcaaacacacatcggtg
aaagacttgttcgcatctgcagaagcagaaaaacatgcttctgggttgtctggaattggt
gatgttgggtcaacgttgcggcatgctgatactactgcaacatctgagcttgcttttgga
agcttcgatataaacagggtgttggaatttggatctcctttattggcatcaggtggacag
gaatatgacattgcaaatgataacggcaaaaatccagcagagcgtttagctcgccaaaag
caaaatctccggcgtcgtttaggtctggatgtatgtgagcagttcatggatttcaatgat
gttatcaaagacgaggaccttcttgcccaaaagaattattggggtgcaaatatgcaaaac
aatggattctattcatttaatactggtcagaatattcagcacttggttgcatctatggtt
cccaggtatcccaaacattccaattttcgctccaggcgattaagcgccagggagctcaat
atgctgaagcgtaaagcaaaaagcaatgcaaaagatcatacaaaggctgtacccgaggat
gatgacgttgtgccaaaaagttctggaccgtctaacggggcctcttctgatcaagataca
gttgatgcaatcacagatgaggacaatctggagtacagtgagaatgggagatggcctttt
caacagtttgtagatcaacttattcatgacatgtttgaccctatttgggaagttcgccat
ggcaccattatggctttgagggaaattttgacgcatcaaggtgcttgtgctggagtatat
tttcctgatctgaactcacctttcgctgaccttgatgataaaaacaatttggactccctg
aaaagagcacatggtattgatcttaatgaagacattgattcgggacagctcgagccagtt
ttgaaaagacaaaagaaagaggagtctaatccagaggttatggacattcagttggataag
gagccaagtaacggtgattattccaaaacagaggcaagtctgagtactgagcctactgta
tctagtggtgaaccaaatcttgctcatgcaaaggttgaatcacccttccaggttgatggt
tcagctaacccatctaaggtggatccatattgtacaccacctcacgaaacactcaactcc
atgcccaaactgagttctacccatctccctgaaaattcaaaatttataaagctgatgaaa
ctagcgaactactcagcggtaaaaaattgggaatttcttcaagactgtgcaattcgtttc
ctttgtgtactttcattggaccgctttggtgattatgtatctgatcaagtggttgctcct
gttcgtgaaacttgtgctcaagctcttggtgcagttctgaagtacatgcatccgactcta
gtatgccatacactgaatattttgctgcaaatgcagcgcaggcaggagtgggaagttcgt
catgggagtctccttggaattaagtatttagttgctgttcgtcaggaaatgcttaaagac
ttgcttaattatgttcttcatgcctgtaaagctggtctggaggatccagatgatgatgtc
cgggctgtggctgcagaggctctgatcccagctgctgcttctttagttagactaaatgat
caaatgctacattcaattgtgatgttgctttgggatatattgcttgaccttgatgatcta
agcccttctacaagcagtgtgatgaatttgttagctgagatatattctcaaccagagatg
gttccaaagatgcttggcacaacagccataggtggagacaacgaatttgatctaaacagt
gtaactctggttgccggtgaagaaaaaatgggttctaatgataatccttatgtcttagcc
gctctgacaccccgattgtggccttttatgagacatagtattacatcagtccggcgttct
gctgtacgaacattggagaggcttctcgaggttgggaacaccaggaattcagctaaacta
tggcttgcatctatattaggtgatgcgctgcaagttgtcttccagaatcttcttttggag
tcaaatgatgagattattcgatcttctgaaagggcttggaaacttttacttcagtgccct
acggaggaccttgagtctgctgcaagttcatattttagtaattgggtgcaacttgccact
actccatatggcacagcattggattctgcaaaaatgtttttgccagttgcacttccacga
ggaagtcgttcaagagctgctgcaaagatcaaatctgcaaggttagaacatgaaaatacg
agaatgatatcttttggttctaccggagagaacacttcacaggaaaagcattctgaagct
tccttgagtgtttcaaaaataattgtggggtctgattcggacaaatctgttactcatacg
cgagtgctgacgtcaatggcccttggtctgtttgcctctaagttgccagaggggtcgtgg
caagttgttcttggtccactagcaagcgatctcatgtctctctcaggagtccagagacag
gtggcttctatggttattgtttcttggtttaaagacctcagaaaaagtgatcctgctgcg
gtgggtacattgctagctttcttatcctccctgaaagggtggatgttggacttactggct
tgctctgacccttcatttcctacaaaagattctccgcttccatatgctgagcttgcaaga
acatacaggaagatgcgcaatgaagccaataatttgttccagtcaatagaatcttgtgct
cttcttaaagagtatacaagcaacttaaactttgaagctgacatgctgagtgttgatgat
gctattaacttcacttcaaagcttttgttaccatctgaacctgattttagtttggacagt
gataaaattgtcttgaacaatatagagtcagcaaaacaaggtctattgtctacgtcaggc
tacttgaaatgtgttcagaataatttgcatgtgacagtttcctctttagtggcctctgct
gtagtctggatggcagggctgcctagtaagttgaacccagtcattttgcctttaatggct
gctgtaaaaagggaacaggaggaaatacttcaggacaaagctgcagatgcacttgctgag
ctcatttttagttgtgttggccgcaaacctggcccaaacgacaaactaacaaagaacctc
tgcacgttaacatgcactgatgcaagtgagacacctcaagctgcagttataaactcaatt
caggttattgaggaccaaaacttgctgtcgattggtaagcgttttagcaatcacaaatcc
aggggccagatgacttccggtggtgaatcgaagtcggagggttttataagccggcgtgga
tcggagttggcttttaagcatctttgtgagaaatttggagcatccttatttgaaaagctt
cccaagttatgggattgccttacggagtttcttaaacccgtcaagactggagatgatctt
atgaaagaagatccaagtattgcgcagttaggaagatcttgtgaggacaaggaaccgcag
tcccttataaataatatccaggttgttcgttcggttacacctcatttggctgagcccttg
aggcctcaattgctaagtctccttccctgtattcttggttgtgtgcgccatcctcatgtc
gctgtcaggttagctgctgcaaggtgcatcacatcaatggcaaaatcattgactgctaat
gtaatggtaattgtgatagaaaatgtcataccgatgttgtcagattcatcttctgtctgt
gcaaggcaaggagctgggatgcttttgagccttcttgttcagggtttggctgtggagttg
gttccttatgctcctttccttgttgttcctcttctaaggtgtatgagtgatcctgatggt
tctgttagacagactgtaactcacagttttgctgctctggttcctttgttgccattagca
aaaggttctttgttaccggatggactgagtgaacgcttatctagcagtgcagaagatgcg
cagtttctagagcagctcctcgacaactcccaaattgatgattacaagctcagcattgat
ctcagtgttgaactgcgaaggtaccagcaagaaggaattaactggctagcattccttaga
cggttcaagttacatggaattttatgtgatgacatgggtcttggcaaaacactccaggcg
tctgctattgtagcagctgatattgctgagtcacgtgcacggaatgatgagcaagatccg
aaatctttgattatctgcccttctacattagtagcacactgggaatatgaaatagagaag
tacatagacagctctatcatgaaacctcttcagtacatcggttcatcacaagataggatt
atcctccgttctcagtttgataagttcaacgtaatcataacgtcatatgatattatacgc
aaggatattgattttcttgagaatgtcttttggaactattgtgtgctggatgaggggcac
ataataaagaactcaagatctaaaataacatctgctgtgaaacaattgaaagcacaacac
cgtcttatcctcagcggtactccaattcagaataatgtattggagctctggtctctattt
gactttcttatgcctggatttcttgggacagaaaaacagttccaagctacatatggaaaa
ccattgctagcagcaaaagatccaaaatgttcagcaaaggatgctgaagctggcattctt
gctatggaggcactgcataaacaggtcatgccgtttctacttagaagaacaaaggatgaa
gttttatctgatcttcctgagaagattatccaggatagatattgcaatctcagtctattg
cagctcaaactttatgacaaattctccaactccaatgccaaacaagagatttccactata
gtaaaagaaaatgaattagatcaatccacttctcaaccaaaggcaactcgtcatgtgttt
caggcactgcaatatctattaaaactttgtagccatcctttacttgtaactggggaaagc
ccacctgattatcttgtggaccttctaaaggaaatcggtatgggaactggtgatgagctt
catgacctacaccattcccctaaacttgttgctctccaagagatacttcaggagtgtggt
atagggtcagaaatatcaagccctgatgcttctgcagctattgggcaacacagagttttg
atttttgctcaacacaaggctttgcttgacattattgagaaggacctgtttcaatcccat
atgagaagcgttacatatttacggttggacggctctgttgaaccagagaagcgatttgaa
attgtgaaggcattcaactcagatccaaccattgatgtgctcctattaacaactcatgtc
ggtgggcttggattgaatttgacatctgctgacacattggtctttatggaacatgattgg
aacccaatgaaggatcttcaggcaatggacagagcacaccgtctgggtcaaaggaaagtg
gtaaacgtgcaccgtctcatcatgcgcggtaccctggaagagaaggtgatgagtcttcaa
aggttcaaggtgtcggtggccaatgcggtcatcaatgctgagaacgccagcctgaagaca
atgaacactgaccaactgcttgatctgtttgcttcgacgcctgcttccagaaaagcgtct
gtactcccaagcagttcgggtggtgatcagagtaaagattccaaggggaaatctggtggg
aagggtttgaagtccattctgaatggtctggacgagctatgggatcagtctcagtatgca
gacgagtacgatctcaaccagttcttggcgaagctcaacggctga

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