Entry
Symbol
HEMC, HMBS, OsJ_05540, PBG
Name
(RefSeq) porphobilinogen deaminase, chloroplastic isoform 1 precursor
KO
Organism
osa Oryza sativa japonica (Japanese rice)
Pathway
osa01110 Biosynthesis of secondary metabolites
Module
osa_M00121 Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:osa00001 ]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
4328432 (HEMC)
Enzymes [BR:osa01000 ]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.61 hydroxymethylbilane synthase
4328432 (HEMC)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
2:join(3724481..3724650,3725378..3725783,3725957..3726160,3726627..3726804,3726908..3727026)
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AA seq
358 aa AA seq DB search
MPPPPRCAATTAHHSLLGSPTCLARPRRRCCPVRAAVAVQAEAQAKVSLIRIGTRGSPLA
LAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGLFTKEIDDALLQ
GRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPAGSVVGSASLRR
QSQILYKYPSLKVVNFRGNVQTRLRKLKEGDVHATLLALAGLKRLNMAETATSVLSVDEM
LPAVAQGAIGIACRSSDDTMMNYLSSLNHEDTRLAVACEREFLSVLDGNCRTPIAAYASR
DKDGNCSFRGLLASPDGSTVYETSRTGPYDFDIMVEMGKDAGHELKAKAGPGFFDSLQ
NT seq
1077 nt NT seq +upstream nt +downstream nt
atgccgccgccgccgagatgcgccgccaccaccgcccaccactccctcctcggctcgccc
acctgcctcgcgcgcccgcggcggcggtgctgccccgtgcgcgccgccgtcgccgtccag
gccgaggcgcaggccaaggtctcgctcatccggattggcacccgcgggagtcctcttgca
ctggcacaagctcatgaaacccgagacaagctgaaggctgcacactcagagttagccgag
gagggggccgttgagattgtcatcattaagaccacaggagacatgatcttggacaaaccc
ctggcagatataggtggcaagggtttattcaccaaggagatcgatgatgcacttttgcag
ggaaggattgacattgccgtccactcgatgaaagatgttccaacatatttaccagaaggc
acgatattgccttgtaatctcccacgggaagatgtgagagatgcattcatatgcttgact
gcaagttcccttgcggagcttcctgctggcagtgttgttggaagtgcttctctgcgtaga
caatctcaaattctctacaaatatccatcactcaaagttgttaacttcagaggaaatgtt
caaacacgattgaggaaactcaaagaaggagatgtccatgctacattgttggctctagct
ggactaaaacgcttaaacatggcagaaactgcgacatctgtattgtcagtggacgaaatg
cttccagcagttgctcaaggtgctattggaatagcttgcagaagcagtgatgacacaatg
atgaattacttgtcctcattgaaccatgaagataccagattagctgttgcatgtgaaaga
gaattcttgtcagttcttgatggcaactgccgaactccaattgcggcatatgcttctcgt
gacaaggatgggaattgttcattccgagggctattggcttcacctgatggatctacagta
tatgagacttcgagaactggaccttatgatttcgatatcatggttgagatgggtaaagat
gctggccacgagctgaaagcaaaggctggccctggcttctttgatagcttgcaatga