KEGG   Oryza sativa japonica (Japanese rice): 4328436
Entry
4328436           CDS       T01015                                 
Symbol
AGO17, OsAGO17, OsJ_05545
Name
(RefSeq) protein argonaute 17
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4328436 (AGO17)
   03036 Chromosome and associated proteins [BR:osa03036]
    4328436 (AGO17)
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     4328436 (AGO17)
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    4328436 (AGO17)
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     4328436 (AGO17)
   microRNA pathway
    RISC loading complex
     4328436 (AGO17)
SSDB
Motif
Pfam: Piwi ArgoN ArgoL1 ArgoL2 ArgoMid PAZ
Other DBs
NCBI-GeneID: 4328436
NCBI-ProteinID: NP_001396273
LinkDB
Position
2:complement(join(3757778..3757962,3758085..3758116,3758201..3758295,3758387..3758460,3758549..3758681,3758777..3758840,3759023..3759085,3759176..3759318,3759433..3759570,3759645..3759766,3759873..3760038,3760133..3760255,3760400..3760471,3760559..3760666,3761805..3761921,3762028..3762115,3762237..3762328,3762453..3762565,3763069..3763202,3763284..3763639,3763724..3763936))
AA seq 876 aa
MESQRMTWLYDRHHSLKHNKAERQAILSTYRLAKRPNLSSEGMIGESCIVRTNCFSVHLE
SLDDQTIYEYDVCVTPEVGINRAVIRELVKQQKDSGLGGRLPAYDGRKRLYTSGPLPFDS
HRFLVLLDSIEDSPEESRHLRVRDFVVTLKFAAKISLWTLRKFRGGKPNRESRAALRALD
VVLKELPTARYTQFAGSFYSPNLGECRQLCKVLESWRGFHQRIQATQMGLQLNIDVSSSV
FIKPVPVVDYVAQLLNEDILLDRPLCSTEFLKIKEALEGLKVQINGILFNTYHVQDLVHQ
AASFPVNFSIQYPSLPCLKVAHFGETIFLPLEVCKIAEGQCHQKQLNAKHMAALLQVARQ
PPNERDYNILQTVHQNKYQEDPHAKEFGIKIEEKLVSIKSRILPAPWLKFHDSGETTEFL
PQLGIWNMMHKKMINGGRVKSWACVNFCWSVREYAARNFCYDLGFMCRESGMVFSVKPVL
PLVIAKPGCVESALRTLHDDVMDILRPQGRKLDLLIVILPNNNGSLYGDVKRICETDIGL
ISQCCLAKHVLKMNKWYLASVALKINAKMGGRNTVLVDALEMRLPHVRDTPTIVFGAHVT
HPHPGKANSSSIAAVVASQDWPEVTKYAGLISVQACHQESIQGLFKVQDDPERGTTTSGM
IKEHLMSFYRATKRKPGRIIFYRDGVSKGQLPQALMHELGAIKMACASMGPDYNPLVTYV
VLQKCRHTRLFADYYNANTHDSTANIRAGTVVDSNICQPNQFDFYLCSHRSTQGTKRPRY
YHVLWDENDFLAGSFQELTNYLCYTSATCTQSISVVAPVHYARLLSSRARCYIKPRSIGD
STSHTSLPSEEDSSAASETGSLLPIKDNLKGAMFFC
NT seq 2631 nt   +upstreamnt  +downstreamnt
atggagagtcagagaatgacctggctctacgatcgtcaccactccttgaaacataataaa
gctgaaagacaagccattctatcaacttatagattagcaaaacgtccaaatctctcttca
gaaggtatgattggcgaaagttgcattgtgaggacaaattgtttcagtgttcatctggag
tctttggatgatcagactatctatgaatatgatgtatgtgtcactcctgaggttggaatc
aatcgtgctgttattagagagttggtaaaacagcagaaagattctggtttgggtggccgt
cttcctgcctatgatggaaggaagaggctatacacatctggtccattgccatttgattca
catagatttcttgttctgctggatagtattgaagacagtcctgaagagtcaaggcacttg
agagtgagagattttgtggtcactttaaaatttgctgcaaaaatttccttatggacttta
cgcaagttccgtggtgggaagccaaaccgagaaagtcgagcggccctgcgagcacttgac
gttgttctaaaggaattacccactgcaaggtatacccaatttgctggttcattttactca
cctaacttaggagaatgccgacaattgtgtaaggtcttggaaagctggcgtggttttcac
caaagaatacaagctactcagatgggacttcaactgaatatcgacgtgtcatcatcagtg
ttcatcaagcctgtacctgtggttgactatgttgcacagcttcttaacgaggacatctta
ttagacagaccattatgtagcactgagttcttgaagattaaggaggctctagaaggtctg
aaggttcagattaatggcattttgttcaacacatatcatgtacaagaccttgtccatcaa
gcagcaagttttccagttaactttagtattcagtacccatctttgccttgcttgaaagtg
gctcattttggggagacaatatttctgccattggaggtctgtaaaattgctgagggacaa
tgtcaccagaaacagctcaatgcaaaacatatggctgctcttcttcaggtagctcgacag
ccccctaatgagcgtgactacaacattctgcagactgtgcatcagaacaaataccaggag
gacccacatgctaaagagtttggcattaaaattgaggaaaaacttgtatcaattaaatct
cgcatcctacctgctccttggcttaaattccatgacagtggcgagacgacagaattcttg
ccacaacttggcatatggaatatgatgcataagaaaatgatcaatggtgggagagtgaaa
agctgggcatgtgttaacttttgctggagtgtacgggagtatgctgctaggaatttctgt
tatgaccttggctttatgtgccgagaatctgggatggtcttttcagttaaacctgtgctt
cctctagtgattgctaaacctggatgtgtagaatctgcactcaggacacttcatgacgat
gtcatggacatacttagaccacagggcagaaaacttgacctgctgattgtaatattgcct
aacaacaatggatctctttatggtgatgtcaaaagaatatgtgagacagatattggactg
atctctcaatgttgtcttgcaaaacatgttcttaagatgaacaagtggtatcttgcaagc
gttgcccttaaaatcaatgctaagatgggcggaagaaatactgtactggttgatgcttta
gaaatgagactcccccatgttagggatacaccaactattgtatttggtgctcatgtcacc
catccacatccaggaaaagctaatagttcttccattgctgctgttgttgcttctcaagac
tggcccgaggttaccaagtatgctggtttaatcagtgtgcaagcgtgccaccaggagtca
atacaaggtctttttaaagtccaggatgatccggaaagaggaaccacaactagcggaatg
atcaaagagcatctcatgtctttctatcgagccactaaacggaagcccggaaggattata
ttttacagggatggtgtgagcaaaggacagctccctcaggctttgatgcacgaacttggt
gccatcaaaatggcgtgtgcatctatgggacccgattataatccattagttacatacgtg
gtgctccagaagtgtcgccatacacgtctgtttgctgactactataatgcgaatactcat
gattcaactgcaaacatacgggctggtactgtggttgattcaaatatttgccaaccaaat
cagtttgatttctacttgtgtagccaccgcagcacgcagggaactaagcggcccaggtat
tatcatgttctgtgggacgagaacgacttcttggctggttctttccaagagctcacaaac
tacctctgctacacctccgcaacttgcacccaatccatatcagttgtggcccctgtgcac
tacgctcgtcttctgtcatcacgagctcgatgttacattaaaccacgctcgattggcgat
tcaacgagccacacctccttgccttctgaagaagatagcagcgcagcctcagagactggc
agtcttcttcctataaaggataatttgaaaggggccatgtttttctgctag

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