KEGG   Oryza sativa japonica (Japanese rice): 4328500
Entry
4328500           CDS       T01015                                 
Name
(RefSeq) ubiquitin receptor RAD23b
  KO
K10839  UV excision repair protein RAD23
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03420  Nucleotide excision repair
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4328500
  09124 Replication and repair
   03420 Nucleotide excision repair
    4328500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:osa03051]
    4328500
   03400 DNA repair and recombination proteins [BR:osa03400]
    4328500
Proteasome [BR:osa03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    4328500
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      4328500
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD TECR_N UBA_3 Ubiquitin_4 KIP1 MCM_N Dsc3_N DUF3391
Other DBs
NCBI-GeneID: 4328500
NCBI-ProteinID: NP_001412630
LinkDB
Position
2:join(4417572..4417637,4418278..4418439,4419099..4419137,4419213..4419280,4419367..4419411,4419821..4419998,4420083..4420214,4420287..4420352,4420841..4420888,4420997..4421106,4421387..4421468,4421575..4421688)
AA seq 369 aa
MKLTVKTLKGTQFEIRVQPNDTIMAVKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE
ENKVSEVGFLVVMLSKSKASGSSGALSSLTSSTPLTRQETPADASRAAPQPLVAPTRTPQ
PERPPAEAPSNAYGQAASNLLSGSNLDTTINQLMEMGGGSWDRDKVQRALRAAYNNPERA
VEYLYSGIPITAEVAVPAGGQGANTTEPSSTREASLSGIPNASPLNLFPQGDANDGGGAG
GGTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKKNPQLLRLIQENHDEFLQLINEPF
DGADGDFLDQPDQDEMPHSINVTPEEQEAIGRLEGMGFDRARVIEAFFACDRNEQLAANY
LLEHAADED
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgaagctgacggtgaagaccctcaagggcacccagttcgagatccgggtgcagcccaac
gacaccattatggctgtcaagaagatcattgaagagatacaaggaaaggatagctaccca
tggggccaacagttgctgattcacaatggcaaggttttgaaagatgaaagtacattggaa
gagaacaaagtcagtgaagttgggtttttagttgtcatgcttagtaagagtaaagcttct
ggttccagtggagctttaagttcactgacttcaagcacccctttgaccaggcaagaaact
cctgcggatgcttcacgagcagctcctcaacccctagttgcacctacaagaacaccccag
cccgaaaggccacctgcggaagccccttcaaacgcatatggtcaagcagcatcaaatcta
ttgtcgggaagcaatcttgacactacgattaaccagctgatggaaatgggtggtggcagt
tgggacagagataaagtccaaagagctctacgtgcagcttataacaacccagagcgtgct
gttgaatatctatattctggcattccaattacagcggaggttgctgttccagcaggtggt
caaggggcaaacacaaccgagccatcttctactagggaagccagtctgtctggaattcca
aacgcatccccgttaaatcttttcccacagggcgatgcaaatgatggaggtggtgctggt
ggtggaacacttgagttccttagacataaccaacagtttcaggcgcttcgggaaatggtt
catactaacccacaaatattgcagcctatgctccaggaactgagcaagaagaatcctcaa
cttctgaggttgattcaggagaaccatgatgagttccttcagttaataaatgagcccttt
gatggtgctgatggggacttcttagaccaacctgaccaggatgagatgccccattctatc
aatgtcacacctgaagagcaagaggcgattggacggcttgaaggcatgggatttgacaga
gcacgtgtcatcgaagcattcttcgcctgtgacaggaacgagcaactcgcagcaaattac
cttcttgaacatgctgctgatgaagattag

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