Entry |
|
Name |
(RefSeq) ubiquitin receptor RAD23b
|
KO |
K10839 | UV excision repair protein RAD23 |
|
Organism |
osa Oryza sativa japonica (Japanese rice)
|
Pathway |
osa04141 | Protein processing in endoplasmic reticulum |
|
Brite |
KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
4328500
09124 Replication and repair
03420 Nucleotide excision repair
4328500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:osa03051]
4328500
03400 DNA repair and recombination proteins [BR:osa03400]
4328500
Proteasome [BR:osa03051]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
4328500
DNA repair and recombination proteins [BR:osa03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
4328500
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
2:join(4417572..4417637,4418278..4418439,4419099..4419137,4419213..4419280,4419367..4419411,4419821..4419998,4420083..4420214,4420287..4420352,4420841..4420888,4420997..4421106,4421387..4421468,4421575..4421688)
|
AA seq |
369 aa
MKLTVKTLKGTQFEIRVQPNDTIMAVKKIIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE
ENKVSEVGFLVVMLSKSKASGSSGALSSLTSSTPLTRQETPADASRAAPQPLVAPTRTPQ
PERPPAEAPSNAYGQAASNLLSGSNLDTTINQLMEMGGGSWDRDKVQRALRAAYNNPERA
VEYLYSGIPITAEVAVPAGGQGANTTEPSSTREASLSGIPNASPLNLFPQGDANDGGGAG
GGTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKKNPQLLRLIQENHDEFLQLINEPF
DGADGDFLDQPDQDEMPHSINVTPEEQEAIGRLEGMGFDRARVIEAFFACDRNEQLAANY
LLEHAADED |
NT seq |
1110 nt +upstreamnt +downstreamnt
atgaagctgacggtgaagaccctcaagggcacccagttcgagatccgggtgcagcccaac
gacaccattatggctgtcaagaagatcattgaagagatacaaggaaaggatagctaccca
tggggccaacagttgctgattcacaatggcaaggttttgaaagatgaaagtacattggaa
gagaacaaagtcagtgaagttgggtttttagttgtcatgcttagtaagagtaaagcttct
ggttccagtggagctttaagttcactgacttcaagcacccctttgaccaggcaagaaact
cctgcggatgcttcacgagcagctcctcaacccctagttgcacctacaagaacaccccag
cccgaaaggccacctgcggaagccccttcaaacgcatatggtcaagcagcatcaaatcta
ttgtcgggaagcaatcttgacactacgattaaccagctgatggaaatgggtggtggcagt
tgggacagagataaagtccaaagagctctacgtgcagcttataacaacccagagcgtgct
gttgaatatctatattctggcattccaattacagcggaggttgctgttccagcaggtggt
caaggggcaaacacaaccgagccatcttctactagggaagccagtctgtctggaattcca
aacgcatccccgttaaatcttttcccacagggcgatgcaaatgatggaggtggtgctggt
ggtggaacacttgagttccttagacataaccaacagtttcaggcgcttcgggaaatggtt
catactaacccacaaatattgcagcctatgctccaggaactgagcaagaagaatcctcaa
cttctgaggttgattcaggagaaccatgatgagttccttcagttaataaatgagcccttt
gatggtgctgatggggacttcttagaccaacctgaccaggatgagatgccccattctatc
aatgtcacacctgaagagcaagaggcgattggacggcttgaaggcatgggatttgacaga
gcacgtgtcatcgaagcattcttcgcctgtgacaggaacgagcaactcgcagcaaattac
cttcttgaacatgctgctgatgaagattag |