Oryza sativa japonica (Japanese rice): 4328514
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Entry
4328514 CDS
T01015
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
4328514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osa03009
]
4328514
Ribosome biogenesis [BR:
osa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
4328514
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
DUF5088
Motif
Other DBs
NCBI-GeneID:
4328514
NCBI-ProteinID:
NP_001396288
LinkDB
All DBs
Position
2:join(4573584..4573586,4573734..4573811,4574332..4574356,4574438..4574470,4574602..4574723,4574798..4574928,4575077..4575300,4575392..4575633,4575836..4575925)
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AA seq
315 aa
AA seq
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MYFEGYGYRGSTFEQTYRCYPASFIDKPQLETGDKIIMPPSALDRLASLHIEYPMLFEVH
NAAAERTSHCGVLEFIAEEGMIYMPYWMMQNLLLTEGDMVFIKNANLPKGTYVKLQPHTT
DFLDISNPKAILEKTLRNYSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD
FAPPLDYKEPERQKAAVPPSTAPTAEEAAEEEPKFIPFTGPGRRLDGKAPKDKDVSASSP
AKRQANATNSVQPSTASTSQSSSSRKTTEKLVFGPGGNRTSKETEKVPEKEPKEDPKKDE
PKFSAFTGRKYSLKG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgctac
cctgcgtctttcattgacaagcctcagcttgaaactggtgacaaaattattatgccacct
tctgctctggatcgtctagcatctctgcatattgaatatcctatgctatttgaagtccac
aacgcggcagcagaacggacttcacactgtggtgtcctggagttcattgcagaagaaggc
atgatctacatgccatattggatgatgcaaaatcttcttctaacagagggggatatggtg
ttcataaaaaatgccaatctccctaaaggaacatatgtgaagctgcagcctcacacaaca
gacttcttagacatttcaaacccaaaagcaatcttggagaaaacattgcggaattactct
tgtctaaccactggtgacagcattatggtagcatataataacaagaaatactacattgat
atagtggaaacaaagccttccaatgctatcagtattattgagaccgactgtgaagtcgac
tttgctccaccacttgactataaagaacctgagcgacaaaaagctgctgttcctccaagt
acagcgcctactgctgaagaggcagctgaagaagaaccaaagttcatcccctttactgga
cctgggaggcgtctggatgggaaggctcctaaagataaggatgtatcagcttcatcccct
gcaaaacggcaagctaatgcaacaaacagcgtgcagccctcaacagcgtccacatcacag
agcagttcatctcgtaaaaccacggaaaagcttgtttttggccctggtgggaaccgcaca
tctaaggaaacagaaaaggtgcctgaaaaggaaccgaaggaggatcccaagaaagatgaa
ccgaaattctcagcttttacaggaaggaaatactcattgaagggctga
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