Oryza sativa japonica (Japanese rice): 4328617
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Entry
4328617 CDS
T01015
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00040
Pentose and glucuronate interconversions
osa01100
Metabolic pathways
Module
osa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
4328617
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
4328617
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
RHS_N
Motif
Other DBs
NCBI-GeneID:
4328617
NCBI-ProteinID:
NP_001396319
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All DBs
Position
2:join(5421923..5422525,5423072..5423379,5423879..5424317)
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AA seq
449 aa
AA seq
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MVSSTRRTTSSLSATTAAAIAAAAAALMVSVAFATAQYTPATPAAPGAAAAGAAAGATPA
APYTPATPGAAGAAPSVPAGPLDIAQLGAKGDGTSDSTAFVLQAWKNACNATGTQKIVIP
PGNYLTGALNLKGPCTSSIILRLDGNLLGTGDLNAYKTNWIEVEHVDNFAINGHGIIDGQ
GPLVWTHNQCNKNYNCKILPNSLVIDYSTNVTVRGITLKNSKFFHLNIYESKNVVIDKVT
ITSPGDSPNTDGIHVGDSTNITISSTTIAAGDDCISIGPGTKMVRVNGVRCGPGHGISVG
SLGRYKDEKDVEDIIVTNCTIKGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYPII
IDQKYCPNNICSASGTSKVAVTDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVDLK
YAGQGNTTLSVCKNVAGKSSNVAKELACV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggtttcctccacgagaaggacgacctcgtctctatccgccaccaccgccgccgccatc
gcggcggcggcggcggcgctgatggtgtccgtggcgttcgccacagcgcagtacacgccg
gccacgccggcagcgccgggggctgcagcggcgggtgcggcggcgggggcgacgccggcg
gcgccgtacacgccggccacgccgggggcggcgggggcggcgccgtcggtgccggcgggg
ccgctggacatcgcgcagctgggggcgaagggcgacgggacgagcgacagcacggcgttc
gtgctgcaggcgtggaagaacgcgtgcaacgcgacggggacgcagaagatcgtgatcccg
ccggggaactacctcaccggcgcgctcaacctcaaggggccgtgcaccagcagcatcatc
ctccgcctcgacggcaacctcctcggcaccggcgacctcaacgcctacaagaccaactgg
atcgaggtggagcacgtcgacaacttcgccatcaacggccacggcatcatcgacggccag
ggccccctcgtctggacccacaaccagtgcaacaagaactacaactgcaagatcctcccc
aatagcttggtgatcgactactcgacgaacgtgacagtgagggggataacgctgaagaac
agcaagttcttccacctcaacatatacgagagcaagaacgtggtgatcgacaaggtgacc
atcacgtcgccgggggacagcccaaacacggacggcatccacgtcggcgactccaccaac
atcaccatcagctccaccaccatcgccgccggcgacgactgcatctccatcggccccggc
accaagatggtccgcgtcaacggcgtccgctgtggccccggtcacggcatctccgtcggc
agcctcggccggtacaaggacgagaaggacgtggaggacatcatcgtcaccaactgcacg
ataaagggcaccacgaacggcctccggatcaagtcgtacgaggactccaagtcgcagctg
agggcgaccaagttcctgtacgacggcatcaccatggacaacgtgagctacccgatcatc
atcgaccagaagtactgccccaacaacatctgctccgcgtccggcacgtccaaggtcgcc
gtcaccgacatcgtcttcaagaacatcgtcggcacgtcggcgacgcccgaggccgtcacg
ctcaactgcgccaacaacctgccgtgccagggcatccagctgcacaacgtcgacctcaag
tacgccggccaagggaacaccaccctctccgtctgcaagaacgtcgccggcaagtccagc
aacgtcgccaaggagctcgcctgcgtctga
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