KEGG   Oryza sativa japonica (Japanese rice): 4328642
Entry
4328642           CDS       T01015                                 
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B
  KO
K03064  26S proteasome regulatory subunit T4
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03050  Proteasome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    4328642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:osa03051]
    4328642
Proteasome [BR:osa03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     4328642
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_2 RuvB_N AAA_5 PRS7_OB AAA_22 nSTAND3 DUF815 TIP49 Prot_ATP_ID_OB_N AAA_7 AAA_14 Parvo_NS1 RNA_helicase Mg_chelatase AAA_33 Sec8_N Sigma54_activat AAA_3 NACHT AAA_28 AAA_18 AAA_24 NPHP3_N TsaE bpMoxR ABC_tran IstB_IS21 ATPase AAA_lid_PRS2_C AAA_11 AAA_25 ATPase_2 eIF-1a PhoH NB-ARC ResIII
Other DBs
NCBI-GeneID: 4328642
NCBI-ProteinID: XP_015624666
UniProt: Q9FXT8 Q6H718
LinkDB
Position
2:complement(join(5606502..5606576,5606662..5606760,5606825..5607016,5607681..5607818,5608104..5608190,5608272..5608358,5608484..5608645,5608778..5608914,5609172..5609291,5611357..5611462))
AA seq 400 aa
MADGEDAAAARRRASVTEYRKKLLNCRELESRVSTVRENLKNAKKDFTKTEDDLKSLQSV
GQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPR
EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY
GPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD
EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPG
RLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMA
AIRAERDYVVHEDFMKAVRKLNDAKKLESSAHYSADFGKE
NT seq 1203 nt   +upstreamnt  +downstreamnt
atggccgacggggaggacgccgccgccgcccgccgccgcgcctccgtgacggagtaccgg
aagaagctgctcaactgcagggagctcgagtcgcgcgtcagcaccgtgagggaaaaccta
aaaaatgctaagaaggactttacaaagaccgaagatgacttaaaatccctgcaaagtgtt
gggcagatcatcggagaggttctccgccctcttgataatgaacgttttattgttaaggct
agcagtggtcccagatatgtggttggttgccggagcaaagtggacaaggagaaattgact
tcgggaactcgtgttgttcttgacatgacaacactgacaatcatgcgcacacttccacgt
gaggtggaccctgtggtttacaacatgcttcatgaagaccctggtaatgtcagttactct
gctgttggtggtctgtctgatcagattagagagctcagggagtccatcgaattgccctta
atgaaccctgagctctttcttcgtgttgggatcaagccccccaagggtgttctactctat
ggtccaccaggaactggtaagacactattggcgagggctattgccagtaacatcgatgcc
aactttttgaagattgtttcaagtgctataattgacaagtacattggagagagtgcccgc
ttgattagggaaatgtttggctatgcacgtgatcatcaaccatgcataatcttcatggac
gaaatcgatgccattggtgggcggcggttcagtgaaggaactagtgctgatcgcgagatc
cagcgcacactgatggaactgctaaatcagttagatggatttgatgaacttggaaaggtg
aaaatgatcatggctaccaatagacctgatgttctggaccctgcgctactgcgtcctgga
cgtctagacaggaagattgagattccgctaccaaatgagcaagcaagaatggaagttctt
aaaatccatgctgctggtattgccaagcatggagaaattgattatgaggcagttgttaaa
ctggctgagggcttcaatggggctgatcttcgcaacgtctgcactgaagcgggtatggct
gcaattcgtgctgaacgggactacgttgtccatgaggacttcatgaaggctgtcaggaag
ctgaacgacgccaagaagctggaatccagcgcccactacagtgcagacttcggcaaagag
taa

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