Oryza sativa japonica (Japanese rice): 4328642
Help
Entry
4328642 CDS
T01015
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B
KO
K03064
26S proteasome regulatory subunit T4
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
4328642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
osa03051
]
4328642
Proteasome [BR:
osa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
4328642
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_2
RuvB_N
AAA_5
OB_PRS7
AAA_22
nSTAND3
DUF815
TIP49
Prot_ATP_ID_OB_N
AAA_7
AAA_14
Parvo_NS1
RNA_helicase
Mg_chelatase
Sec8_N
AAA_33
Sigma54_activat
AAA_3
NACHT
AAA_28
AAA_18
AAA_24
TsaE
NPHP3_N
eIF-1a
IstB_IS21
bpMoxR
ABC_tran
AAA_25
ATPase
AAA_lid_PRS2_C
AAA_11
SPG5_C
ATPase_2
PhoH
ResIII
NB-ARC
ApoB100_4ins
Motif
Other DBs
NCBI-GeneID:
4328642
NCBI-ProteinID:
XP_015624666
UniProt:
Q6H718
Q9FXT8
LinkDB
All DBs
Position
2:complement(join(5606502..5606576,5606662..5606760,5606825..5607016,5607681..5607818,5608104..5608190,5608272..5608358,5608484..5608645,5608778..5608914,5609172..5609291,5611357..5611462))
Genome browser
AA seq
400 aa
AA seq
DB search
MADGEDAAAARRRASVTEYRKKLLNCRELESRVSTVRENLKNAKKDFTKTEDDLKSLQSV
GQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPR
EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY
GPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD
EIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPG
RLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMA
AIRAERDYVVHEDFMKAVRKLNDAKKLESSAHYSADFGKE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggggaggacgccgccgccgcccgccgccgcgcctccgtgacggagtaccgg
aagaagctgctcaactgcagggagctcgagtcgcgcgtcagcaccgtgagggaaaaccta
aaaaatgctaagaaggactttacaaagaccgaagatgacttaaaatccctgcaaagtgtt
gggcagatcatcggagaggttctccgccctcttgataatgaacgttttattgttaaggct
agcagtggtcccagatatgtggttggttgccggagcaaagtggacaaggagaaattgact
tcgggaactcgtgttgttcttgacatgacaacactgacaatcatgcgcacacttccacgt
gaggtggaccctgtggtttacaacatgcttcatgaagaccctggtaatgtcagttactct
gctgttggtggtctgtctgatcagattagagagctcagggagtccatcgaattgccctta
atgaaccctgagctctttcttcgtgttgggatcaagccccccaagggtgttctactctat
ggtccaccaggaactggtaagacactattggcgagggctattgccagtaacatcgatgcc
aactttttgaagattgtttcaagtgctataattgacaagtacattggagagagtgcccgc
ttgattagggaaatgtttggctatgcacgtgatcatcaaccatgcataatcttcatggac
gaaatcgatgccattggtgggcggcggttcagtgaaggaactagtgctgatcgcgagatc
cagcgcacactgatggaactgctaaatcagttagatggatttgatgaacttggaaaggtg
aaaatgatcatggctaccaatagacctgatgttctggaccctgcgctactgcgtcctgga
cgtctagacaggaagattgagattccgctaccaaatgagcaagcaagaatggaagttctt
aaaatccatgctgctggtattgccaagcatggagaaattgattatgaggcagttgttaaa
ctggctgagggcttcaatggggctgatcttcgcaacgtctgcactgaagcgggtatggct
gcaattcgtgctgaacgggactacgttgtccatgaggacttcatgaaggctgtcaggaag
ctgaacgacgccaagaagctggaatccagcgcccactacagtgcagacttcggcaaagag
taa
Oryza sativa japonica (Japanese rice): 4341487
Help
Entry
4341487 CDS
T01015
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B
KO
K03064
26S proteasome regulatory subunit T4
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
4341487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
osa03051
]
4341487
Proteasome [BR:
osa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
4341487
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
RuvB_N
AAA_2
AAA_5
AAA_22
nSTAND3
OB_PRS7
DUF815
AAA_14
AAA_7
TIP49
RNA_helicase
Parvo_NS1
Mg_chelatase
Prot_ATP_ID_OB_N
AAA_28
AAA_3
NACHT
NPHP3_N
AAA_33
TsaE
Sigma54_activat
AAA_18
AAA_24
IstB_IS21
bpMoxR
ABC_tran
ATPase
AAA_lid_PRS2_C
At4g15545_C
eIF-1a
AAA_25
ATPase_2
AAA_11
PhoH
ResIII
NB-ARC
Motif
Other DBs
NCBI-GeneID:
4341487
NCBI-ProteinID:
XP_015641387
UniProt:
A3BDF5
Q69Q32
LinkDB
All DBs
Position
6:join(25044610..25044718,25045450..25045569,25045793..25045929,25046030..25046191,25046319..25046405,25046484..25046570,25046929..25047066,25047635..25047826,25047899..25047997,25048102..25048176)
Genome browser
AA seq
401 aa
AA seq
DB search
MAAEGEDAAAARRRAAATDYRKKLLTCRELEARARTARDNLKNAKKDFGKTEDDLKSLQS
VGQIIGEVLRPLDSERFIVKASSGPRYVVGCRSKVDKEKLIAGTRVVLDMTTLTIMRTLP
REVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPKLFLRVGIKPPKGVLL
YGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFSYAREHQPCIIFM
DEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRP
GRLDRKIEIPLPNEQSRMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGM
AAIRAERDYVIHEDFMKAVRKLNDAKKLESSAHYSADFGKE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggggaggacgcggcggccgcgcgacgccgcgcggcggccaccgactac
aggaagaagctcctcacctgcagggagctcgaggcgcgcgcccgcacggcaagggacaac
ctgaaaaatgcaaagaaagattttgggaaaaccgaggatgacttgaagtcattgcaaagt
gtaggccaaataattggtgaagtacttcgaccattggatagtgaacgattcatcgtcaaa
gccagcagtgggccccgctatgttgttggctgccgaagtaaagttgacaaagaaaagttg
attgctggaacgagggttgttcttgacatgacaacccttaccatcatgcgcacactgcca
cgagaggttgatccagtggtatataacatgctacatgaagaccctggcaacgtcagttac
tcagctgtgggtggattgtcggatcaaataagggaacttagggagtccattgaacttccc
ctgatgaatccaaaattgtttcttcgtgtagggattaaaccgccaaagggtgttctgctc
tatggtccacctggaactgggaagacactacttgctagagctattgccagtaacattgat
gcaaactttttaaagattgtgtcaagtgctatcattgacaagtacataggtgaaagtgca
cgtctcataagagagatgttttcctatgcacgggagcatcaaccatgcatcattttcatg
gatgaaattgatgccatcggtggccgaaggttcagtgaaggaaccagtgctgaccgggaa
attcagagaacactaatggagctcttaaaccagttagatggatttgatgagcttggaaag
gtaaaaatgatcatggcgactaatcgtcctgatgttttggaccctgcactccttcgtcct
gggcggttggacaggaagattgaaattccactgccaaatgagcagtcgaggatggaagtc
ctcaaaattcacgcagctggtattgctaaacatggtgaaatcgattatgaagctgtcgtg
aagctagctgaaggcttcaatggtgccgatctgcgcaatgtctgcactgaggctggcatg
gctgctattcgagcagagcgcgactatgtcattcatgaagatttcatgaaggcggtgcgc
aagctgaacgacgccaagaagctcgagtctagtgcgcactacagcgcggactttggcaag
gaatga
DBGET
integrated database retrieval system
