Oryza sativa japonica (Japanese rice): 4328674
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Entry
4328674 CDS
T01015
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A
KO
K03066
26S proteasome regulatory subunit T6
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
4328674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
osa03051
]
4328674
Proteasome [BR:
osa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
4328674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_16
nSTAND3
PRS7_OB
AAA_22
RuvB_N
TIP49
AAA_28
AAA_24
AAA_33
AAA_3
Mg_chelatase
PhoH
AAA_14
AAA_18
Parvo_NS1
ATPase
RNA_helicase
IstB_IS21
AAA_17
DUF815
ABC_tran
AAA_11
AAA_7
AAA_19
AAA_25
DUF5906
TsaE
Sigma54_activat
bpMoxR
RsgA_GTPase
DUF2072
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
4328674
NCBI-ProteinID:
XP_015626915
UniProt:
Q6Z6C9
Q7GCH3
LinkDB
All DBs
Position
2:complement(join(5929966..5930106,5930800..5930910,5930998..5931096,5931181..5931337,5931469..5931632,5931712..5931774,5931848..5932072,5932733..5932830,5933978..5934194))
Genome browser
AA seq
424 aa
AA seq
DB search
MATVAMDISKPPPAAGGDEAAAAKGRGGAGGGGGEGLRQYYLQHIHDLQLQIRQKTHNLN
RLEAQRNDLNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSI
DITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKE
VIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY
IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDG
FEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGI
DLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLR
KLWK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccacggtggcgatggacatctccaagccccctcccgcggcgggcggcgacgaggct
gcggcggcgaaggggaggggcggcgccggaggaggaggtggggaggggctgcggcagtac
tacctgcagcacatccacgacctgcagctccagatccggcagaagacgcacaacctcaac
cgcctcgaggcccagcgcaacgacctcaactcccgagttagaatgctcagggaagagctg
cagttgcttcaagaacctggctcgtatgttggtgaggtggtgaaggtcatgggtaaatca
aaggttctagtgaaggtacatccagaaggcaaatatgtggtggatattgataaaagcatt
gatattacaaagatcacaccttcaacaagagttgctcttcgaaatgatagctatatgctt
catttgatcctgccaagcaaagttgatccgttggtcaatcttatgaaagttgagaaggtt
cctgattctacttatgatatgattggaggtcttgatcagcaaatcaaagagatcaaagag
gtcattgaacttcctatcaaacatccagagctatttgagagtcttggaattgcccaacca
aagggtgtccttctctatggccctccaggcacaggaaaaacattgttggcacgtgcagtt
gctcatcacactgactgcaccttcatcagggtgtctggttccgagttagttcagaagtac
attggtgagggttctcggatggtccgtgaactctttgttatggccagggaacatgcacca
tccattattttcatggatgaaatagactccattggatctgctaggatggagtctggaact
ggcaacggtgacagtgaagtccagcgaaccatgcttgagcttctgaaccaacttgatggt
tttgaagcatcaaacaaaataaaggttctgatggcaacaaataggatagacatcttggat
caggcccttctgaggcctggtcgcatagacaggaaaattgaatttcctaatcctaatgag
gattcacgctttgatatcttgaagattcattcaagaaaaatgaacttgatgcgtggtatt
gatctgaaaaagatcgctgaaaagatgaatggggcttcaggagccgagctcaaggcggtc
tgcacagaagctggaatgtttgctcttcgtgagagaagggtgcatgtaacacaagaggac
tttgagatggcagtggcgaaggtgatgaagaaagacacggaaaagaacatgtccctacgg
aagctctggaagtga
Oryza sativa japonica (Japanese rice): 4341448
Help
Entry
4341448 CDS
T01015
Symbol
P0457B11.5
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A
KO
K03066
26S proteasome regulatory subunit T6
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
4341448 (P0457B11.5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
osa03051
]
4341448 (P0457B11.5)
Proteasome [BR:
osa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
4341448 (P0457B11.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_16
AAA_2
AAA_22
nSTAND3
RuvB_N
PRS7_OB
TIP49
AAA_28
AAA_33
Mg_chelatase
AAA_3
AAA_14
Parvo_NS1
AAA_18
ATPase
DUF815
AAA_24
IstB_IS21
RNA_helicase
AAA_17
AAA_7
AAA_19
PhoH
DUF5906
ABC_tran
TsaE
Sigma54_activat
AAA_25
TMF_TATA_bd
RsgA_GTPase
bpMoxR
NB-ARC
Zeta_toxin
AAA_11
Sec10_N
DUF2072
Motif
Other DBs
NCBI-GeneID:
4341448
NCBI-ProteinID:
NP_001411082
LinkDB
All DBs
Position
6:join(24536974..24537187,24537498..24537595,24538070..24538357,24538441..24538604,24538740..24538995,24539102..24539212,24539505..24539645)
Genome browser
AA seq
423 aa
AA seq
DB search
MATADVSRPSSSAPTAAAAGADGHGAKGSAFRGDGLRPYYQSRIHDLQLQIRQGTDNLSR
LEAQRNVLNSQVITLGEELKVLHEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDVDKSID
ITKLSPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEV
IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI
GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMQSGSGGGDSEVQRTMLELLNQLDGF
EASNKIKVLMATNRMDILDQALLRPGRIDRKIEFPNPNEDSRFDILKIHSRKMNLMRGID
LKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVNQEDFLMAVAKVMKKDTEKNMSLRK
LWK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggacgtctcgcggccctcctcctccgcgccgacggcggcggctgcgggg
gcagacggccacggggcgaaggggagcgccttccgcggcgacgggctgcggccgtactac
cagtcgcgcatccacgacctgcagctccagatccgccaagggacggacaacctcagccgc
ctcgaggcccagcggaacgtcctcaattcccaagttataacgctgggggaagagttgaag
gtgctccatgaaccgggctcatatgttggtgaggttgtcaaggttatgggcaagtccaag
gttctagtgaaggtgcacccagaaggaaaatatgttgttgatgtcgataaaagtattgat
attacaaagctctcgccttcaacaagagttgctcttcgaaatgacagctatatgcttcat
cttatcctgcccagcaaagttgatccattggttaatcttatgaaggttgagaaggttcct
gattctacttatgatatgattggcggccttgatcagcagattaaggagatcaaagaggtt
attgagcttcccattaagcatcctgagctgtttgaaagtcttggaattgcccagccaaag
ggtgtccttctttacgggcctccgggtacaggaaaaacgctactagctcgggcagttgct
catcacaccgactgtacctttattagggtgtcaggttccgagttggttcagaagtatatt
ggagagggttccagaatggttcgtgaactatttgtgatggccagagagcatgcaccatcc
ataatctttatggatgaaatagactccattggatctgctagaatgcagtcaggatctggg
ggtggtgatagtgaggttcaacgcactatgcttgagcttctgaatcaacttgatggcttt
gaagcatcaaacaaaattaaggttcttatggcgacaaataggatggatattttggatcaa
gctctcctgaggcctggtcgcattgataggaagattgaatttccaaatccgaatgaagat
tcccgctttgatatcttgaagattcattcaagaaaaatgaacttgatgcgtggcattgat
ctgaaaaagattgcagagaagatgaatggggcatctggagcagagcttaaggcggtctgc
acggaagcaggaatgtttgcccttcgcgagagaagggttcatgtcaaccaggaggatttc
ttgatggcggtggcgaaggtgatgaagaaggataccgaaaagaacatgtccctgcgcaag
ctctggaagtga
DBGET
integrated database retrieval system
