KEGG   Oryza sativa japonica (Japanese rice): 4328769
Entry
4328769           CDS       T01015                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03015  mRNA surveillance pathway
osa04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    4328769
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    4328769
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:osa01009]
    4328769
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4328769
   03036 Chromosome and associated proteins [BR:osa03036]
    4328769
Protein phosphatases and associated proteins [BR:osa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     4328769
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     4328769
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     4328769
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_RIG_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ComGF
Other DBs
NCBI-GeneID: 4328769
NCBI-ProteinID: NP_001396799
LinkDB
Position
2:complement(join(6989069..6989205,6989343..6989410,6989800..6989877,6989977..6990068,6990156..6990224,6990781..6990904,6991061..6991184,6991989..6992107,6992386..6992477,6992669..6992875,6993244..6993363,6994108..6994203,6994283..6994386,6996135..6996282))
AA seq 525 aa
MDPSSKSPDDDDLRPEAEAARRPQPQPQPREWRFAQVFGERAAGEDVQEVDIISAIEFDK
SGDHLATGDRGGRVVLFERTDSRDSASRSELERQDYPIARHPEFRYKTEFQSHEPEFDYL
KSLEIEEKINKIKWCQTANNALFLLSTNDKTIKYWKVQERKVKRISVMNLNTSQSSGNGT
TSSSSSSSSRAILPNGGCSEKLYNFPNNDLLFPPGGCTSLRLPVVVTGQDLNLVPRCRRV
YSHAHDYHINSISNNSDGETYISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITC
AEFHPTHCNTLAYSSSKGSIRLIDLRQSALCDNHAKLFEEHEAPGSRSFFTEIIASVSDI
KFARDGRHILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLS
GDGLRVATGSYSNLFRVFGCTPGSAEATTLEASRNPMRRQVANPTRPARTLTSLTRAVRR
GGENPGVDANGNSYDLSTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggacccctcctccaagtcccccgacgacgacgacctccgccccgaggcggaggcggcg
aggcggccgcagccgcagccgcagccgcgggagtggcggttcgcgcaggtcttcggggaa
cgcgcggcgggggaggacgtgcaggaagttgacatcatctctgcaattgagtttgacaaa
tccggtgaccatcttgccactggagatagaggtggtcgtgtagttttatttgaaaggact
gactccagggatagcgccagtcggagtgaacttgagagacaagattacccgattgccagg
catcctgaattccgttacaagactgaatttcagagtcatgaacctgagttcgactaccta
aaaagtttggaaatagaggagaagattaacaagatcaagtggtgccaaacagccaacaac
gccctctttctcttatctacaaatgataaaacaatcaagtattggaaggtgcaagagagg
aaagtaaaacgaatttcagtgatgaatttgaatacctctcaaagttcaggcaatggcaca
acttctagttcaagcagcagtagttctagagcgattcttccaaatggtggatgctcagag
aagttatacaacttcccaaacaacgacctattatttcctcctggaggatgcacatcattg
cgtctgcctgtggtagtcactggccaagatttgaaccttgtaccaagatgccggcgtgta
tattcacatgctcatgattaccatattaattccatttcaaataatagtgacggggagaca
tacatatcagcagatgatctgcgaataaatctttggaacctggaaattagcaaccaaagc
tttaatattgttgatgtgaagcctgcaaacatggaggacctaactgaggtgatcacatgc
gcggagttccacccaactcattgtaatacattagcctatagtagctcgaagggctctatc
aggcttattgatctgcggcaatcagcactatgtgacaaccatgctaagttatttgaggag
catgaggcacctggatcgagatccttttttacagagataattgcatcggtttcagatata
aaatttgcaagggatggaaggcacattcttagtcgtgattatatgactctcaagttatgg
gatataaacatggattcaggcccagttgcaactttccaagttcatgaatatttaagacct
aagctctgtgatctatatgaaaatgattcaatatttgacaaatttgaatgttgtctgagt
ggggatggacttcgtgttgcaactggctcttacagcaatttatttcgtgtttttggttgt
actcctggaagtgcggaggcaaccaccttggaagcaagcagaaatcctatgaggcgccag
gttgctaatccaacaaggcctgcacggaccctgacctcattgacccgtgccgtgaggaga
ggtggagaaaatccgggagttgatgctaatggaaattcttacgatctttcaacaaagttg
ctccatcttgcatggcacccaactgagaattccatcgcgtgtgctgctgcaaatagcttg
tacatgtactatgcatag

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