Entry |
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Name |
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
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KO |
K05391 | cyclic nucleotide gated channel, plant |
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Organism |
osa Oryza sativa japonica (Japanese rice)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:osa00001]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
4330882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:osa04040]
4330882
Ion channels [BR:osa04040]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
4330882
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:join(33145538..33145972,33146604..33146789,33147148..33147246,33147842..33147979,33149108..33149365,33151841..33152104,33152258..33152403,33152594..33152671,33153578..33153707,33153872..33154118,33154206..33154368,33154702..33154876)
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AA seq |
772 aa
MSDQERDDIPMLLRNVELPTFPPRSTSMCIPVRDDEYEEDTFVPHTGPLFVQPPTQTAAA
GIPFTNTPDMPPRPPQGKQVNKPHAIMPEEIGGNRWSYSGNVPKNEHLMMSGPLGQCDDP
DCVNCPPACKNKRHFHRGSSTLDSKFHNFLCEHGGGWKKEIERFLSRIPVMNPHAKVVQQ
WNQFFVISCLVAIFIDPLFFFLLSVQKDNKCIVLNWHFATALAVVRSVTDAIYFLHMLLQ
FRLAYVAPESRVVGAGDLVDEPKKIAVRYLRGYFLLDFFVVLPLPQVMILLVIPKYVGLS
TANYAKNLLRITVLLQYVPRIIRFVPLLGGQSDSSANGFIFESAWANFVINLLMFVLAGH
VVGSCWYLFGLQRVNQCLRNACSASKIPSCDGFIDCGRGINIGKQNQLSRQQWFNDSAST
ACFDTGDNGFHYGIYEQAVLLTTEDNAVKRYIYSLFWGFQQISTLAGNLVPSYFAWEVLF
TMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMQLRRRDVEQWMSHRRLPEDLRRRVRRA
ERFTWAATQGVNEEELLSNLPEDIQRDIRRHFFRFLNKVRLFTLMDWPILDAICDKLRQN
LYISGSDILYQGGPVEKMVFIVRGKLESISADGSKAPLHEGDVCGEELLTWYLEHSSANR
DGGRMRFHGMRLVAIRTVRCLTNVEAFVLRASDLEEVTSQFSRFLRNPRVQGAIRYESPY
WRTIAATRIQVAWRYRNRRLKRAGMSKLNDQSYNSALERGARECDARQHGRV |
NT seq |
2319 nt +upstreamnt +downstreamnt
atgtctgaccaggagagagatgatattcctatgctactaagaaatgttgagctaccaacg
tttcctcctagaagtacatcaatgtgcataccagttagggatgatgaatacgaagaagac
acatttgtaccccatactggtcctctgtttgttcagccaccaacacaaactgcagcagcg
ggcattccatttacaaatacaccagatatgcctcctcgacctccacaaggaaaacaagtc
aacaagccacatgcgataatgccagaagaaattggaggaaacaggtggtcttatagtggg
aatgttccaaagaatgaacatttgatgatgtctggacctttgggacaatgtgacgatcct
gattgtgtcaactgccctcctgcttgtaaaaacaaaaggcattttcacagaggatcaagt
acattggacagtaagttccataattttctttgtgagcatggtggtggatggaagaaggaa
attgagcgtttcctttcacgcattccagttatgaacccacatgcaaaagttgttcagcaa
tggaatcagttctttgtgatatcatgcctggttgccatattcattgacccactatttttc
ttcctattatcagttcaaaaggataacaagtgcattgtgttgaactggcattttgctaca
gcacttgcagttgtgagaagcgtgactgatgctatttattttctacacatgcttcttcag
ttcagactggcttatgtagctccagaatcgcgagtagtgggagctggagatttagtagac
gagccaaagaaaattgctgtccgttatcttcgtggatattttttactcgacttcttcgtt
gtgcttccactccctcaggtgatgatattgctggtcatccctaaatatgttgggttatca
actgcaaactatgctaagaatttactgcgtatcactgttcttcttcagtatgttccccgc
atcatcagatttgtaccattgcttggtggtcagtctgactcatctgccaatggattcata
ttcgagtcagcgtgggctaactttgtgattaaccttctaatgtttgttttggcgggacat
gttgttggttcatgttggtacctatttggattgcagagggtcaaccaatgcctacggaat
gcttgttctgcatcaaaaattccatcttgtgatggttttatagattgtggacgtggcatt
aatattgggaagcagaatcaactaagcagacagcagtggtttaatgattcagcctcaaca
gcttgtttcgacactggagacaacggtttccactatgggatttatgaacaggctgttttg
ctaactacagaggacaatgctgttaaacgttatatatattcattattttggggtttccag
caaataagtacgctagctggtaatcttgtcccaagttattttgcatgggaagtcctgttt
actatggctattattggtttggggctgttgcttttcgcattacttattgggaacatgcaa
aattttctccaagctcttggaagacggagactagaaatgcaacttaggaggcgtgatgtt
gaacagtggatgagccatagacgcctgccagaagatttaagaaggagggttagacgcgca
gaaaggttcacctgggcagctacccaaggggtgaatgaagaggagcttttaagtaattta
ccagaagatattcaaagggacatacgccgtcatttctttagatttcttaacaaggtccga
ttattcacattgatggattggcctatcttggacgctatatgtgacaaactaagacaaaac
ttgtatattagcggaagtgacatcctttatcaaggtggtccagttgaaaaaatggtcttc
atagtgaggggaaagctagaaagcatcagtgcagatggaagcaaagctccgttacatgaa
ggtgatgtatgtggagaggagctcctgacatggtacttggaacactcttcagctaacaga
gatggtgggagaatgagattccatggtatgcgtttggttgctattcgtactgtaagatgt
ttaacaaatgttgaagcttttgtactaagggcaagcgatctcgaagaagtaacttcacaa
ttttcacgattcttgcgcaatccacgagtgcagggtgcaatcaggtatgagtcaccctac
tggagaaccattgctgcaacgcgtattcaagtcgcatggaggtatcggaataggcgattg
aagcgagctgggatgtcgaagttgaacgatcaatcttataattctgcattggaacgtggc
gcgcgtgaatgtgatgctcgtcagcatgggcgggtatga |