Oryza sativa japonica (Japanese rice): 4329066
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Entry
4329066 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4329066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4329066
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4329066
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
4329066
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
4329066
NCBI-ProteinID:
XP_015626757
UniProt:
Q6KAC3
Q0E1X5
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All DBs
Position
2:complement(join(11186752..11187114,11187255..11187641,11189829..11190128))
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AA seq
349 aa
AA seq
DB search
MDMASIECVSYSDSMDDDDDDGVGVGGVSHLPRPILVKPSSAAAAVNVVVVSAGSGGGAG
GGGGGVGVVAGAPAVPPATSVHELLECPVCTNSMYPPIHQCQNGHTLCSTCKTRVHNRCP
TCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHESQCNFRPYNCPYAGS
ECSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCL
HFEAFQLGVAPVYMAFLRFMGDENDARNYSYSLEVGANGRKMIWEGTPRSIRDSHRKVRD
SHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQQNPDSGACIPNLFS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcgagcatcgagtgcgtctcctactccgacagcatggatgacgacgacgac
gatggcgtcggcgtcggcggcgtctcccacctgccacgccccatcctcgtcaagccctcc
tccgccgccgccgccgtcaacgtggtcgtcgtctccgcgggcagcggagggggcgcgggg
ggaggaggaggaggggtcggggtcgtggccggggcccccgccgtccccccggcgacgagc
gtccacgagctgctcgagtgccccgtctgcaccaactccatgtacccgcccatccaccag
tgccaaaatggtcatactctgtgttcaacctgcaaaacccgtgtgcacaaccgctgccca
acctgtcgacaggagcttggtgatattagatgtctagcattggagaaagtggctgaatcg
cttgagctaccctgcaaatattactcactaggttgtccagaaatctttccgtactacagc
aaactcaagcatgaatcacagtgcaatttcaggccatacaactgcccttatgctggctct
gaatgctcagttgtcggggatattcctttcctagttgctcatctgagggatgaccataaa
gttgacatgcactcagggtgcacattcaaccatcgctatgttaagtcaaaccccagagag
gtcgaaaatgctacttggatgttgactgtctttcactgctttgggcagtacttctgcttg
catttcgaggccttccaacttggagtggctccggtttacatggccttcctccgttttatg
ggcgacgaaaatgatgccaggaactatagttatagccttgaggttggcgcgaatggccgg
aagatgatatgggagggcactccccgcagcataagggacagccaccggaaggttagggac
agccatgacggcctcataattcagcggaacatggctctgttcttctcaggcggagagagg
aaagagttgaaattgcgggtcaccggccgaatctggaaggaacagcagaatcctgactcg
ggagcctgcattccaaacctattcagctga
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