KEGG   Oryza sativa japonica (Japanese rice): 4329234
Entry
4329234           CDS       T01015                                 
Symbol
DAPDC, LYSA
Name
(RefSeq) probable diaminopimelate decarboxylase, chloroplastic
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00300  Lysine biosynthesis
osa00470  D-Amino acid metabolism
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01230  Biosynthesis of amino acids
Module
osa_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    4329234 (DAPDC)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    4329234 (DAPDC)
Enzymes [BR:osa01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     4329234 (DAPDC)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N Pox_Rif
Other DBs
NCBI-GeneID: 4329234
NCBI-ProteinID: NP_001403525
LinkDB
Position
2:complement(join(14582057..14582143,14582268..14582357,14582427..14582546,14582864..14583049,14583199..14583360,14587099..14587248,14587978..14588152,14588841..14589343))
AA seq 490 aa
MAAANLLSRALLPALNPNPSSHSNRVSPSAVSLRCRHGLTASVRASLSTAAPSPPPRPAA
AAADGRAPKRCFRRGADGHLYCEGVRVEDAMGAAERTPFYLYSKPQVVRNFTAYRDALEG
LRSIVGYAVKANNNLRVLQLLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLED
LVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVLLRINPDVDPQVHPYVATGNKTSKF
GIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTITKVDIFRDAAGLMVNYVDEIRAQGFE
LEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCFVNR
VTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIELVSPSPDAEVATFDIVGPVCESADF
LGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKLRPPEYWVEDDGSIAKIRRGESFDD
YMKFFDNLSA
NT seq 1473 nt   +upstreamnt  +downstreamnt
atggcggcggccaaccttctctctcgcgcgctcctccctgctctaaaccctaacccaagc
agccacagcaaccgcgtcagcccttcggccgtatctctccgctgccgccacggcctgacg
gcctccgttcgcgcctctctctccacggcagcgccgtccccgccgccgcggccggcggcg
gcggcggccgacggtcgggcgccgaagcgctgtttccggcgcggcgccgatgggcacctg
tactgcgagggggtgagggtggaggacgcgatgggggcggcggagcggacccccttctac
ctctacagcaagcctcaggtggtgcggaacttcaccgcctaccgcgacgccctcgagggg
ctccgctccatcgttgggtacgccgtcaaggccaacaacaatctccgcgtgctgcagctc
ctgcgggagctcggctgcggcgccgtcctcgtcagcgggaacgagctccgccttgccctc
cgggcaggattcgatcccactaggtgtatatttaatggaaatggaaagacattggaagat
cttgttttagctgcagagagcggagtgtttgtaaacatagacagtgaatttgatttggag
aatattgtcactgctgcgagagttgctgggaagaaagtccctgttttgctcaggataaac
ccagatgtggatccacaggtccatccttatgttgcgactggaaacaaaacctccaaattt
ggtatccgtaatgagaaactacaatggttcttagactctatcaagtcatactcaaatgat
atcacactggtgggtgttcattgtcatctgggatctaccattacaaaggtcgatatattt
agagatgcggcaggtcttatggtgaattatgttgatgaaattcgagcacaaggttttgaa
ctggaatatctcaatattggcggtggcctgggcatagattatcaccacacggatgcagtc
ttgcctacacctatggacctcatcaacactgtgcgagaattagttctgtcacgagatctt
acactcatcattgaacctgggagatccctcatagctaacacttgctgcttcgtcaatagg
gtcactggtgttaaatctaatggtacaaagaatttcattgtagttgatggcagcatggca
gagcttatcagaccaagtctatatggagcataccagcatatcgaactggtttctccttcc
ccagatgcagaagtagcaacattcgatattgttggaccagtttgtgaatctgcagatttc
cttggcaaagacagggaacttccaacacctgataagggagctggtttggtggttcatgac
gcaggagcctactgcatgagcatggcttcaacctacaacttgaagttgcgaccacctgaa
tattgggtagaagatgatgggtccattgctaagattcggcgtggagagtcatttgatgac
tacatgaagttctttgataatctctctgcctaa

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