KEGG   Oryza sativa japonica (Japanese rice): 4329282
Entry
4329282           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K03267  peptide chain release factor subunit 3
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    4329282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4329282
   03012 Translation factors [BR:osa03012]
    4329282
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     4329282
Translation factors [BR:osa03012]
 Eukaryotic type
  Release factors
   4329282
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 G-alpha EF-G_D2 Dioxygenase_N
Other DBs
NCBI-GeneID: 4329282
NCBI-ProteinID: XP_015623238
LinkDB
Position
2:complement(join(15612423..15612490,15613118..15613190,15613299..15613484,15614503..15614567,15615348..15615483,15615582..15615687,15615910..15616060,15617085..15617149,15617248..15617402,15617487..15617549,15618114..15618185,15625321..15625366,15626362..15626473,15628663..15628749,15629181..15629231,15630240..15630420))
AA seq 538 aa
MEHDADPAPAPAPAITSLQPADDDWAARDDLEEAPAKPHPHSAARDDDDAREAPRARAAQ
DVNGIKSSLQSLELQSVDLPHDAVQTEAKEEQNRKRHLNVVFIGHVDAGKSTAGGQILFL
SGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERAKGKTVEVGRAHFETETTRFTIL
DAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGVSKLVV
VINKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLLGTNMKTRMDKSN
CSWWSGPCLFEVLDCIQVPLRDPKGPVRMPIIDKYKDMGTVVMGKIESGTISEGDNMLVM
PNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIKNPVSAISEFRA
QLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELIEEIDLKRRKEGDIKKKKSKRKPLF
VKNGAVVVCRVQVNNLICIENFSEFPQLGRFTLRTEGKTVAVGKVVAVPPAGSSTFNV
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggagcacgacgccgaccctgcgcccgcgccggcgccggcgatcacctccctccaaccc
gccgacgacgactgggcggcccgcgacgacctcgaggaggctccagcgaagccccatccg
cattccgcggctcgcgatgacgacgacgcccgagaggcgccccgagcccgtgcggcccaa
gatgtcaatggaatcaagtcaagtcttcagtcactggaattgcagtcagtagatttgcca
catgatgcagttcaaacagaagcaaaggaggaacagaatagaaaacggcatttgaatgtt
gtttttattggccatgttgatgctggtaagtccacagctggaggccagatattgttctta
agtgggcaagtggatgacaggacaatccagaagtatgaaaaagaagcaaaggacaaaagt
cgagagagctggtacatggcatacattatggatacaaatgaggaagaacgggcaaagggg
aagacagttgaagttgggagagcacactttgagacagaaactacaagatttaccatttta
gatgcaccgggccacaaaagttatgttccaaacatgataagcggtgcatctcaagcagac
attggtgttcttgtgatatctgctcggaaaggtgaatttgaaactgggtatgaaagaggc
gggcagactcgcgaacatgtgcttctggcaaaaactttgggtgtttctaagttggttgtg
gtcataaataagatggatgaatctactgttggctggtcgaaagaacgatatgatgaaata
gaaggaaaaatggttccttttcttaaatcatcagggtacaatgttaagaaagatgtccac
ttcttgccaatctctggtcttttggggactaatatgaagacaagaatggataaaagcaat
tgtagctggtggagtggtccatgtcttttcgaagttctagattgcattcaagtcccttta
cgagatccaaaaggtccagtaaggatgccaatcattgataaatacaaagacatgggcaca
gtggtcatgggaaaaattgaatcaggaactatctcggagggtgataacatgttggttatg
ccaaacaaggccaacgtgaaagtcattagtgtacactgtgatgaagatagagtgagaagt
gctgcacctggtgagaatgtccgagtcaaactgtcaggaattgaagaggatgacatcact
gctggttttgtgctatcaagcattaaaaatcctgttagtgctatatctgaatttcgtgct
caactacagatattggagttgcttgacaatgcaatttttactgctggttacaaggcagtg
ctgcatatccactctgtagttgaggaatgtgagattgttgaactcatagaagaaattgat
ttgaagaggaggaaagaaggtgacataaaaaaaaagaagtcaaagaggaaacctcttttt
gtgaagaatggagctgtcgtcgtttgccgtgttcaggtcaataatttgatttgtatcgag
aacttctctgagtttcctcagcttggaagatttacgctccggactgaaggtaagacagtt
gctgtaggaaaagttgttgctgttccacctgctgggagctcaacatttaatgtttag

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