Oryza sativa japonica (Japanese rice): 4329538
Help
Entry
4329538 CDS
T01015
Name
(RefSeq) SNAP25 homologous protein SNAP33
KO
K18211
synaptosomal-associated protein 25
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4329538
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
4329538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
ATG16
TolA_bind_tri
DUF5089
DUF4472
Use1
Motif
Other DBs
NCBI-GeneID:
4329538
NCBI-ProteinID:
NP_001403563
LinkDB
All DBs
Position
2:join(19922306..19922671,19923113..19923206,19923310..19923431,19923538..19923635,19923966..19924065)
Genome browser
AA seq
259 aa
AA seq
DB search
MPVSRGGKAASSKADPFDSDSDSDLVPKKKPGAYTAPSGAAKARYKDDFRDSGGLEQQSV
QELENYAAYKAEETTDALGGCLRIAENIREDAANTLVTLNKQGQQISRTHEKAVEIDQDL
SKGESLLGSLGGFFSKPWKPKKTRQIKGPAHVSDDSFKKKASHIEQREKLGLSPSGKSAN
RSYAEPTTAMEKVQVEKQKQDDALDDLSGVLGQLKGMACDMGSELDRQNKALDDLQGDVD
ELNSRVKGANQRARKLIEK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtcacgtggcggcaaggccgcttcgtcgaaggccgaccccttcgactcggac
tcggactcggacctggtcccgaagaagaagccgggggcgtacacggcgcccagcggcgcg
gcgaaggcgcggtacaaggacgacttccgcgactcgggcgggctggagcagcagtcggtg
caggagctggagaactacgcggcgtacaaggccgaggagacgaccgacgcgctgggcggc
tgcctccgcatcgccgagaacatcagggaggacgccgccaacacgctcgtcaccctcaac
aagcagggccagcagatcagccgcacccacgagaaggccgtcgaaatcgaccaggacctc
tccaagggcgagtcgcttctggggagccttggagggttcttctccaagccatggaagccc
aagaaaacaaggcagatcaagggtccagcccatgtctcggatgattccttcaaaaagaag
gcgagccacatcgagcagagggagaagctagggctgagccctagtgggaagtcggctaat
cgcagctacgccgagcctaccaccgccatggagaaagttcaggtggagaaacaaaagcag
gatgatgccctagatgatctcagtggtgtgcttgggcagctcaagggcatggcttgtgac
atgggttcagagcttgataggcaaaacaaagcgctggatgatctgcaaggcgatgtggat
gaactcaactcgagggtgaaaggagcaaaccaacgtgcacgcaagctaatcgagaagtag
DBGET
integrated database retrieval system
