Oryza sativa japonica (Japanese rice): 4329673
Help
Entry
4329673 CDS
T01015
Name
(RefSeq) RING-H2 finger protein ATL58
KO
K19039
E3 ubiquitin-protein ligase ATL7/58/59 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4329673
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4329673
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
4329673
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
zf_RING_Vps8
DUF1272
zf-RING_4
Prok-RING_4
FANCL_C
zf-RING-like
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
4329673
NCBI-ProteinID:
NP_001403600
LinkDB
All DBs
Position
2:complement(join(21583843..21584251,21585681..21585763,21585870..21586079))
Genome browser
AA seq
233 aa
AA seq
DB search
MSCTSPDPPDYCSAASPELKLYQAFIFSVPVFFTFVLLLFFYLFYLRRRRANWQSLRMRT
NNLIRGDNPRLECGIKKEMREMLPVVVFKESFLIRETQCSVCLADYQPDERLQRIPPCGH
TFHIDCIDHWLSTNTTCPLCRVSLLPSPKTASIDPVDLEAQTVEENSSLDVQYQEGRIDE
NTRQEDQTLQQGSEGPTHQAEENEETSVRVTTEPQVEAEGSPSTTCRPCKTKK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtacctccccagacccgcccgattactgctcggccgcatcgcctgagcttaag
ctataccaagccttcatcttctccgtgccggttttcttcacgttcgtcttgcttctcttc
ttctacttgttctacttgcgacggcgcagagcaaactggcagtccttgcgcatgaggact
aataacttgatacggggagataaccccagattggagtgcggcataaagaaggagatgcgg
gaaatgttgcctgttgtggtcttcaaggagagcttcttgatcagggaaacacaatgctct
gtctgcttagcagactatcaaccggatgagcggctccagagaatacctccttgtggccat
accttccacatcgattgcatcgaccactggctctcgacaaacaccacttgccctctttgt
cgagtatccctccttccatcccccaaaaccgccagcattgatccagtggatttggaagca
cagaccgttgaagagaacagctctttggatgtacagtatcaggagggccgcattgacgag
aacacgcgacaggaggatcagacattgcaacaaggtagtgagggtccaacgcatcaagct
gaagaaaacgaagagacatcagtcagagtaaccactgagccccaagtagaggccgagggg
tctccaagcacaacctgccggccttgtaaaacgaagaaataa
DBGET
integrated database retrieval system
