Oryza sativa japonica (Japanese rice): 4329678
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Entry
4329678 CDS
T01015
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
osa01009
]
4329678
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4329678
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
osa04040
]
4329678
Protein phosphatases and associated proteins [BR:
osa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
4329678
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
4329678
Ion channels [BR:
osa04040
]
Chloride channels
Chloride channel (CLC)
4329678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
SpoVAB
Motif
Other DBs
NCBI-GeneID:
4329678
NCBI-ProteinID:
XP_015626592
UniProt:
B9F0K6
Q6YVX5
LinkDB
All DBs
Position
2:complement(join(21629965..21630078,21630683..21631814,21631926..21632195,21632637..21632899,21633743..21633920,21634378..21634578,21635363..21635619))
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AA seq
804 aa
AA seq
DB search
MEGQSQHRAPEREGSHNYDIESTDGSGGLWRRNGSSSGALLRYNDSGGGRSGSAGEPLLR
KRTMNTTSQIAIVGANVCPIESLDYEVVENDLFKQDWRSRKKKQIFQYIVLKWTLVLLIG
LLTGLVGFFNNLAVENIAGFKLLLTGNLMLKERYLTAFFAYGGCNLVLAAAAAAICAYIA
PAAAGSGIPEVKAYLNGVDAYSILAPSTLFVKIFGSILGVSAGFVLGKEGPMVHTGACIA
NLLGQGGSRKYRLTCNWLRYFKNDRDRRDLITCGSAAGVAAAFRAPVGGVLFALEEAASW
WRSALLWRAFFTTAVVAVVLRSLIEFCRSGKCGLFGQGGLIMFDLSSTVATYSTPDLIAI
IILGIIGGIFGGLFNFLLDKVLRVYSIINERGAPFKILLTITISIITSMCSYGLPWLAAC
TPCPVDAVEQCPTIGRSGNFKNFQCPPGHYNDLASLFFNTNDDAIRNLFSNGTESEFHMS
TLFIFFTAVYCLGILTYGVAVPSGLFIPVILAGATYGRIVGTLLGSISDLDPGLFALLGA
ASFLGGTMRMTVSVCVILLELTNDLAMLPLVMLVLLISKTIADNFNKGVYDQIVVMKGLP
YMEAHAEPYMRHLVAGDVVSGPLITFSGVEKVGNIVHALRFTGHNGFPVVDEPPLTEAPE
LVGLVTRSHLLVLLNGKMFMKDQLKTSGSFVLQRFGAFDFAKPGSGKGLKIQDLDFTDEE
MEMYVDLHPVTNTSPYTVVETMSLAKAAILFRALGLRHLLVVPKTPDRPPIVGILTRHDF
VEEHIHGLFPNLNPHKFHSTSMGG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcagtcgcagcaccgggcgccggagagggaggggagccacaactacgacatc
gagagcacggacgggtccggcgggctgtggcggcggaacggctcgtcgtcgggggcgctg
ctccgctacaacgacagcggcggcggccgcagcgggagcgccggggagccgctgctgcgg
aagcgcaccatgaacaccacctcccagatcgccatcgtcggcgccaacgtctgccccatc
gagagcctcgactacgaagttgttgagaacgaccttttcaagcaagactggcgatcaaga
aagaagaagcagatatttcagtacattgttctgaagtggaccttggtgcttcttattggc
ctgttgactggacttgttggcttcttcaacaatcttgcagttgaaaacattgctggattc
aaactgttgctcacgggtaatcttatgctaaaggaaaggtatttaactgcatttttcgct
tatggaggttgcaatttggtcttagcagctgcagcggcagcaatatgtgcttacattgca
cctgctgctgctgggtctggtattcccgaagttaaagcatatcttaatggagttgatgca
tattcaatattggcccccagtacgctctttgtgaagatatttggttcaatacttggagtt
tcagctggatttgtacttggaaaggaaggtcctatggtacatacaggggcatgtattgcc
aacttgcttggtcagggaggatcccgcaagtaccggcttacatgtaattggctaagatat
tttaagaatgacagggataggcgggatttaattacatgcgggtctgcagctggagtggca
gctgccttccgtgctcctgttggtggtgtcctatttgctcttgaggaagcagcatcatgg
tggcgaagtgctcttttgtggagggcgttctttacaacggctgttgttgctgtcgtgttg
agatctcttattgagttctgtcgtagtggaaaatgcggtctctttgggcaaggtggatta
attatgttcgatctcagttcaactgttgcaacctacagtactccagatctaatagcaata
attatccttggaataattggtggaatctttggaggcctttttaattttctcttggacaag
gttctccgtgtttacagtatcataaacgagagaggtgctccattcaagatccttctcact
ataacaatatcaattatcacatcaatgtgctcttatggtctcccttggcttgctgcgtgc
actccatgtcccgtggatgctgtggagcaatgtcctaccattggacgctctggtaacttc
aagaactttcaatgtccaccagggcattacaatgatcttgcatcactctttttcaataca
aatgatgatgccatccgcaacctctttagcaatgggactgaatctgagttccacatgtcc
acccttttcatctttttcactgctgtgtactgccttggaattctgacgtacggtgttgcc
gtcccatccggtctcttcatccctgttattctcgctggtgcaacatacgggcgcatagtg
gggacacttcttggatccatatccgaccttgatcctggtctttttgcccttcttggtgca
gcatcttttcttggtggaacaatgagaatgaccgtgtcagtctgcgtgatccttctagag
ctcaccaacgacctggccatgctccctctggtcatgcttgttcttctcatatcgaagact
atagcagataactttaataaaggagtttatgatcagatagtggtaatgaaaggcttgcca
tacatggaggctcatgctgaaccatacatgaggcacttggttgctggcgatgttgtgtct
ggcccacttattacgttttcaggtgtcgagaaggtgggaaacattgtccatgcgttaagg
ttcacaggccacaatggattcccagtggttgatgagccacctctaacggaagcacctgaa
ttggtcgggctcgtgacaaggtctcatctgttggttttgctgaatggcaagatgttcatg
aaagaccagctgaaaactagtggtagctttgtccttcaaagattcggtgcctttgatttt
gccaagccagggtcagggaaaggcttgaaaattcaggacctggacttcactgatgaggag
atggaaatgtatgtggatctccatcccgttacaaacacctcaccttatacggtggttgag
acaatgtcactcgcaaaagctgcaatcctattccgtgcactaggattgaggcaccttttg
gttgtgccaaagacaccagataggccacccattgtcggaattctcacgaggcatgatttc
gtcgaagaacatatccacgggctgttcccaaatctcaatcctcacaagttccactcgaca
tcgatgggaggctga
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