Oryza sativa japonica (Japanese rice) (RefSeq): 4329786
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Entry
4329786 CDS
T01015
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00130
Ubiquinone and other terpenoid-quinone biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01240
Biosynthesis of cofactors
Module
osa_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
4329786
Enzymes [BR:
osa01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
4329786
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
4329786
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
4329786
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
4329786
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Abhydrolase_6
TPP_enzyme_N
TPP_enzyme_M_2
MR_MLE_C
Abhydrolase_1
Hydrolase_4
TPP_enzyme_C
Abhydrolase_2
Ndr
Thioesterase
BAAT_C
Abhydrolase_11
DLH
Abhydrolase_3
DUF900
Mbeg1-like
Esterase
LIDHydrolase
TPP_enzyme_M
Abhydro_lipase
Ser_hydrolase
Motif
Other DBs
NCBI-GeneID:
4329786
NCBI-ProteinID:
XP_015626291
UniProt:
F7VJK0
LinkDB
All DBs
Position
2:22415270..22429837
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AA seq
1712 aa
AA seq
DB search
MLAVVFSSGHRLLPLPVLPGTFTTPPPPPPPPLLSPRRPLLAPRRRRCLCGGGGGGLLLL
RAVAARRAGIVIDVDEVGEVGDRDLPVDVSFTRRLPPVLTLGDGLAALRRAGEEVKACPP
AAAASGVIRFEVLVPPSTKALKWLCTQFKRSSLFPQFYLSRKQTTDSSIQLEISGAGSAI
CFHGSSRVDNGFDLISRYLSFNSHLIRAYGSVGVKYDKELLSLEERIGSFYFFIPQVELS
EFDGYSMLSSTIVWDDSVSHTFEDSVCLFESCFSQIWSSYDSSATICYENMVTSYIGESR
MSESRNTQLVYLDAEFLAVIDGKAVTEKENCPTSDQSFVRFSPQFLFCANMDLCLQSNKI
ESFIRRCSNINLAWASFIVEEFVRLGFTYFCIAPGSRSSPLALSASVHPLTTCISCYDER
SLGFHALGYGRGSRKPAIVITSSGTAVSNLLPSVVEASQDFVPLILLTADRPPELQDVGA
NQAINQVNHFGSFVRHFFSLPPPDDHIYARMVLTTVDSAAYYAMQAPQGPVHINCAFREP
LDYGYQDWSVDCLKGLDKWFINREPYTRYLGMKMVSALGNYSCSVREVLEIVKNANQGLL
LVGAIHTEDDIWAVTLLARHLSWPIAADVLSGLRMRKVQKSIPGLDKSICFIDHIDQILL
SESVKSWKTPDVIVQIGSRITSKRVGTYLESCSPSSYILIDAHPCRHDPSHVVTHRIQAT
ITEFAASLCQCNFQTKTSRWSDILMVLNSAVSQEIMFQVHSECSLTEPYVAHVIGEALYG
DATMFIGNSMVIRDLDMFGKGWIDHSTNANNAMMHHFPGFLGAPVAGNRGASGIDGLLST
SIGFAIGSNKHVFCVIGDISFLHDTNGLSLLNQRTQRKPMTVIVINNHGGAIFSLLPVAK
TASLQILEKFFYTLHDISISKLCAAHRIKHILVQTKAELHDALVKSHEGHVDCVVEVENR
IVDNANFHRIISMFTDHSATMHLAYLLGGPYCKDGVNGFSVGRIHAAEYMFYRIQLAAPR
TSGISESSFFHEGFILKLCVGDSIVGFGEVAPIEIHEEDLLDVEEQLRFLFHRMKDAELD
VVPLLRGSFSNWIWTTLGIPPSSVFPSVKCGLEMAILNLLESQRIDRSYGIFTGSNVVEY
NQSSTANIQICALVDSCGTPMDVTLAVVKLVAEGFTTVKLKVGRRENPAEDAAVIQKVRE
IVGYKINIRADANRKWTYEQAIDFGSRVKGLCLQYIEEPVDSVNDIIKFCENSGLPVALD
ETIDNLTGDVIPKLHQFSHPGIVALVIKPSVVGGFETAAYIAKWAHMHDKMAVISSTYES
SVGLATYIQFAHYVDRQNDITSRIKNRGSCGNVAHGLGTYQWLREDVSDQKLKIHAPPLG
DGIRASAEDAHGYLQHLVINDKKIERTYSEEKLRSYFIQVDGDNFSYQVKLQEGGDCTHE
KVILFLHGFLGTSEDWVPMMKALSPSARVIAVDLPGHGESEILQHDVENSNQISFSVQSV
ADLLLKLIRNITDGAVVVVGYSMGARIALHMALNQNHKISGAVIISGSPGLRDEASKRRR
SAIDRSRAHFLSSCGLENFLETWYSAKMWASLREHPKFDSLVRTRMKHNNIKALSKVLAD
SSIGTQKSLWEDLKHLKSPLLIVAGEKDPKFKEISQQMCREIRKHKDRESDGLCEMIIIP
DSGHAVHVENPLPLVRAIRKFLVRDIPDVISK
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgtcgtcttctcctccggtcaccgcctcctccccctccccgtcctccccggc
acattcaccacccctcctcctcctcctcctcctcctctcctatcccctcgccgtcctctg
ctcgcccctcgccggcgccgctgcctatgcggcggcggcggtggcggcctcctcctcctt
cgcgccgtcgccgcgaggcgcgcgggcatcgtgatcgacgtcgacgaggtgggcgaggtc
ggcgaccgcgacctccccgtggacgtgtcgttcacccggaggctgccgccggtgctcacc
ctcggggacggcctcgccgcgctgcggcgggccggggaggaggtgaaggcctgcccgcct
gccgccgccgcgagcggcgtcatccggttcgaggtgcttgttccacccagtacgaaggcg
ctcaaatggctgtgcacacagtttaagagatcatcattgtttcctcagttttatttgtcg
aggaagcaaaccactgattcatcaattcagcttgaaatctctggcgctggctctgcaatt
tgctttcatggttcctctcgagtagataatgggtttgatttgatatcaagatatctttcg
tttaattcacacttgattagagcctatggatcagtaggtgttaaatatgacaaggaacta
ttgtctttagaggagagaattggttcattttacttctttattcctcaggttgagctgagt
gaatttgatggctattccatgttatcgtcaactattgtttgggatgactccgtgtctcac
acatttgaggattctgtttgtttatttgaatcttgtttcagtcagatatggagtagctat
gattcttcagctactatctgttatgaaaacatggtaacaagttacattggagaatcgcgt
atgtcagagagcaggaatactcagttggtatacttggatgctgaatttctcgctgtaata
gatggcaaagctgtcacggaaaaggagaattgcccaacttctgatcagtcatttgttcgg
ttttcgccgcagttcttgttttgtgcaaacatggatttatgtttgcaaagcaacaaaatt
gaatctttcattaggagatgctctaacattaatttggcatgggcatccttcatagttgaa
gaatttgtcaggcttggttttacgtacttctgtatagctccagggtcgagatcatcccca
cttgcactttctgcttcagtccatcctttgacaacctgcatatcatgttatgatgagcgt
tcacttggatttcatgctcttggctatgggagaggttctcggaagcctgcaatagtaatt
acatcatcaggaactgctgtatcaaatctccttccttcagtggtggaggcaagtcaagat
ttcgtaccacttattttactcacagctgatcgtcctcctgagctgcaggatgtaggagcc
aaccaagccatcaatcaggtaaatcattttggcagttttgtaagacacttttttagtctc
cctccaccagatgatcatatttacgcgagaatggttcttacaacagttgattcagcagcc
tactatgccatgcaagcaccacaagggccagtgcatataaactgtgcttttagagaacca
ctagactacggatatcaagattggagtgttgactgtttgaaagggttggacaaatggttt
ataaatagagaaccatacactagatacctaggaatgaaaatggtttctgcattaggtaac
tattcttgttcagtaagggaggttctggagattgtaaagaacgcaaaccaggggctttta
ttagttggtgctattcacacagaagatgatatctgggctgtgactttactagctagacac
ctttcctggccgattgctgctgatgttctgtctggattgcgaatgaggaaagtacagaaa
tcaattccaggactagataagagcatttgttttatagaccacatagatcaaattctactg
tctgaatctgttaaaagctggaaaactccagatgttattgtccagattggaagccggatc
actagcaaacgagtgggaacatatcttgagtcctgctccccgtcttcttacatcttaatt
gatgcacacccatgccgccatgatccttcacatgttgtcactcacagaatccaggctact
ataactgaatttgctgctagtctgtgccagtgtaatttccaaacaaagacaagcagatgg
tcagatattttaatggttctgaattcagcggtttcacaggagataatgtttcaggtgcat
tcagaatgttcacttacagaaccatatgttgctcatgtaattggagaagcactttatggc
gatgctactatgtttattgggaatagcatggtcattcgagacttggatatgtttggcaag
ggctggattgaccatagtacaaatgcaaataatgctatgatgcaccattttccaggcttt
cttggtgcaccagtagctgggaacaggggagcaagtggtattgatggtttgcttagtaca
tcaattggatttgccattggatcaaacaagcatgtattctgtgtgattggtgacatatct
tttcttcatgataccaatggattgtcacttctgaaccaaaggacgcagaggaaacccatg
acagtaattgtcattaacaaccatggtggtgcaatcttcagccttctaccagttgcaaaa
acagcttcactccaaattttggagaaatttttctacaccttgcatgacatatcgatttcc
aaactctgtgctgcacacaggataaaacatattctagttcagacaaaagctgaacttcat
gatgccttagtgaagtcccatgaggggcatgttgattgtgttgtcgaagtggagaatcgc
attgttgataatgccaactttcatagaattataagcatgttcacagaccatagtgcaacc
atgcatctggcatatcttctgggaggtccatattgtaaggatggggtaaatggcttttct
gttggtagaatacatgcagcagaatacatgttttacaggatccaacttgctgcaccacgt
acatctgggatatcagaaagcagcttctttcatgaaggtttcatactaaagttatgtgtg
ggtgacagcattgtgggattcggcgaggttgcaccaattgaaattcatgaggaggatctg
ttggatgttgaagaacagcttaggtttctctttcacagaatgaaagatgctgagctagat
gttgttcctttgttgagaggatccttctccaattggatatggacaacccttgggattcct
ccttcttcagtattccctagtgttaagtgtggtctagagatggctattcttaatttgctg
gagtcacaacgaatagatagatcctatggtatttttactggctccaatgtggtcgaatat
aatcagagcagcactgcaaacatacagatatgtgcactcgtagactcctgtggcactcca
atggatgtaacacttgctgttgtcaaacttgttgctgaaggtttcaccaccgttaaactg
aaggttgggcgtcgcgaaaatcccgctgaagatgcagctgttattcaaaaagtaagggaa
attgtaggatacaagatcaatatccgtgctgacgcaaataggaaatggacatatgaacag
gcaattgattttggatccagggtaaaaggcttatgtttgcaatacatcgaggaaccagtg
gactctgtaaatgacatcatcaagttctgtgaaaatagtggcttgcctgttgcactagac
gagactatcgacaaccttacaggggatgtaatccctaagctacatcaattttcacatcca
ggaatagttgctcttgttataaaacccagtgttgttggtggctttgagactgcagcttat
atagcaaaatgggctcacatgcatgataagatggctgtcatcagtagcacctatgagagt
tctgtaggtttggcaacctatatacagtttgcacattatgttgacagacaaaatgacata
acatccagaataaagaacagaggttcttgtggaaatgtggcacatggacttggaacatac
caatggttaagggaagatgtttcagatcaaaagttaaaaatccatgcgccaccacttggt
gatggaatcagagcttcggcagaagatgcccatggctatctccagcatttagttataaac
gacaagaagatagaaagaacttatagtgaagaaaaattgaggtcatatttcatccaagtt
gatggggataatttttcttatcaagtcaagcttcaagagggtggtgattgcacacatgaa
aaggttattctctttcttcatggatttcttggtacgagtgaagactgggttccaatgatg
aaagctctctctcctagtgcacgggttatagctgtcgatcttcctggccatggcgagtcc
gaaattctacagcatgatgttgaaaactccaaccaaatctccttttcagttcaatcagtt
gcagatttgttactgaagttgataagaaatataactgatggagcggtggttgttgttggc
tactcaatgggtgcaaggattgcactacacatggcattaaatcaaaaccacaagataagt
ggagctgttataatttcgggtagtcctggattgagagacgaggcaagtaaaagacgtcgt
agtgctattgatagatcaagagcccacttcttgtcttcttgtggactggaaaattttctc
gagacgtggtactctgcgaaaatgtgggccagtttacgagaacatcctaaatttgattct
ctagtgaggacacgaatgaaacacaataatatcaaagctctatctaaggttctcgctgac
tcaagcatagggacgcaaaagtccctgtgggaagatttgaagcacttgaagagccctctc
ctcatcgtcgcaggtgaaaaggacccaaaattcaaagagatatcgcagcaaatgtgcagg
gagataagaaagcacaaggatcgcgaatccgatggtctatgtgagatgatcattattcca
gacagcggccacgccgtgcacgttgagaaccctcttcctttagttagagcaatcaggaag
ttcttggtaagggatataccagacgtgatatccaagtag
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integrated database retrieval system
