KEGG   Oryza sativa japonica (Japanese rice): 4329863
Entry
4329863           CDS       T01015                                 
Name
(RefSeq) mRNA export factor GLE1
  KO
K18723  nucleoporin GLE1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03013  Nucleocytoplasmic transport
osa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4329863
   03015 mRNA surveillance pathway
    4329863
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4329863
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     4329863
SSDB
Motif
Pfam: GLE1 Borrelia_P83
Other DBs
NCBI-GeneID: 4329863
NCBI-ProteinID: XP_015622845
UniProt: B7EM97 Q0DZV5
LinkDB
Position
2:complement(join(23615007..23615228,23615321..23615443,23615981..23616109,23616309..23616392,23617127..23617222,23617853..23617934,23618165..23618235,23618387..23618481,23619208..23619394,23619704..23619875,23620918..23621066,23621696..23621819,23621954..23622109,23622219..23622365,23622459..23622460))
AA seq 612 aa
MGFARVELRCPRALDPRPSWTLGDVLTELDALEATRRTAQPTPLKQPPEWASSGSVREKA
FVMRVEEEDDTDEDDYDSDGESRALVAKATGARFSCNDLESSDAEESEDEMDGRIAPYHL
MEKRSLEKSILLELEREHHLKVQEEVRSKLSALEVCHQSEIQRTVSAFARLQKYAESRKE
IDRRLDVHFQRKIAEVLDKHLSMVQRDHEQKSQIVERRIRDDAALEEAKRKEQAMKDEKI
RQERAKQEAEARQKAAAKLAVEAQKAAAEAAAKEAAEAQKAAAEVSKSSQNSQNNVAGTM
RANKSEIKSELPGIKVFADHSALEAELRRRALLDQVPANIHSSKEFSRYDRQIAKSIGKL
MPTTDSVKARAGELIKALDGQDCPRPIACRIFANKIISIVKSRNTKDKTFGNLAFACGYV
MLLVTSQVPDAMDYLLAEFHRVCMYTVPKHLHALNAQVRNRDYYRLIGYQEENGQLESTE
SYLTYVAAYVKLYAAMIQTEIRGVRHPHGLAEGWKWLAMFLNTLPATTATACALHAFLKV
AGFALHKKYGSQFMKLLDVILRCFLPALKEQGSRIQAEAASNLQNYLTDKVYLEEPEGQY
LAQQLLSKELFT
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgggcttcgcgcgcgtggagctgcggtgccctagggccctcgacccccgcccgagctgg
accctcggcgacgtcctcaccgagctcgacgcgctcgaggccactcgccgcaccgcgcag
cccacgcccctcaagcagccgccggagtgggctagcagtggcagcgtgagggagaaggcc
tttgtgatgcgggttgaagaggaagatgacacggatgaggacgattacgacagtgatggg
gagtcccgggctcttgtggccaaggccactggagcaaggttctcatgcaatgatcttgaa
tccagtgatgctgaagaatcagaggatgaaatggatggcaggattgcaccatatcacctg
atggagaaacggagcctagagaagagcattctgcttgagctggaacgtgagcatcatctg
aaagttcaagaggaagtcagaagtaaactatctgcattggaggtatgccaccaaagtgaa
atccagcgaacagtttctgcatttgctcgactacagaaatacgcagaatcaagaaaagag
atagacagaaggctagatgtccacttccagagaaaaattgcagaagtacttgataaacat
ttgtctatggtccaaagggatcatgaacagaaatcgcaaattgtggaacgtagaataaga
gatgatgctgctcttgaagaagctaaaagaaaggagcaagccatgaaggacgaaaaaata
aggcaggaaagagccaaacaagaagcagaggccagacagaaggcagctgcaaagttagca
gtggaagcacagaaagcagcagctgaggctgctgcaaaggaagcagcagaagctcagaaa
gcagcagctgaggtttccaaatccagccaaaattctcagaacaacgttgcaggaacaatg
agggcaaacaagagtgaaattaaatctgaattaccagggatcaaagtctttgctgatcat
tctgcactggaagcagaattgcggaggcgtgcattacttgatcaagtgccagcgaacatt
cattccagcaaggagttcagcagatatgaccgacaaattgcaaaatctattggtaaactt
atgccgactactgacagtgtaaaagcaagggctggtgagcttattaaagctttggatgga
caggattgcccacgtccaattgcttgccgtatatttgcaaacaagattatttcaatcgtc
aagagtagaaatacaaaggacaaaacatttggaaatttggcctttgcttgtggatatgtc
atgcttctagtcaccagccaggtaccagatgcaatggattatcttctagctgagttccac
agagtttgcatgtacacagttccaaagcatctgcatgctttaaacgcacaagtacggaat
agagattattacagactgattggctaccaggaagaaaatggacaactcgagagcactgaa
agttatttgacatatgttgccgcatacgtcaagctgtatgctgcaatgattcagaccgaa
attaggggcgtgcggcatccacatggcttagctgaggggtggaaatggcttgccatgttc
cttaatactctcccggccaccacagcaactgcttgtgcccttcatgctttcctcaaggtt
gctggttttgcacttcacaagaaatacggatcacagttcatgaaacttctagatgtaata
ttgcggtgcttcttacccgctttgaaggaacaaggctcacgaattcaggctgaggctgca
agtaatctacagaattatctgactgacaaggtttaccttgaggaaccagaaggccagtac
cttgcgcaacagcttctatctaaagagttgttcacgtga

DBGET integrated database retrieval system