Oryza sativa japonica (Japanese rice): 4329866
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Entry
4329866 CDS
T01015
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2
KO
K12195
charged multivesicular body protein 6
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03250
Viral life cycle - HIV-1
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
4329866
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4329866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4329866
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4329866
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
4329866
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
4329866
Exosomal proteins of other body fluids (saliva and urine)
4329866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
TINF2_N
DUF5069
Parathyroid
Motif
Other DBs
NCBI-GeneID:
4329866
NCBI-ProteinID:
XP_015623412
UniProt:
B9F0V5
LinkDB
All DBs
Position
2:complement(join(23642541..23642566,23642647..23642815,23642954..23643037,23643613..23643765,23643916..23644068,23645606..23645707))
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AA seq
228 aa
AA seq
DB search
MGNIFVKKPKVTDVDRAILTLKTQRRKLAQFQQQLEKVIEAEKEAARQLVQQKKKDRALI
ALKKKKAQEELLKQVDTWQMNVEQQLSDIELASKQKAVFDSLKAGNAALKSIQNEINIDD
VQKLMDDTAEAKAYQDEINAALGEQLSAEDEEAVMAEFENLEAQLAVESLPDAPVTEVRP
EEKSETPAVTEAAEDIDEVIELPDVPTKAPERPEAAEKTKVLEEPLPA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggggaacatcttcgtgaagaagcccaaggtgacggacgtggacagggccatcctcacc
ctcaagacgcagcgccggaagctcgcgcagttccagcagcagcttgagaaggtgattgaa
gcagaaaaggaagctgcacggcagctagttcaacaaaagaagaaagacagagctttgatt
gcactgaagaagaagaaagcacaggaagagctgctgaaacaagttgacacatggcaaatg
aatgtcgaacaacagctgtcagacattgaactagcaagtaaacagaaggctgtatttgac
agcctaaaagctggaaatgctgctcttaagtctatccagaatgagataaatattgatgat
gtccaaaagttgatggacgacacagctgaggccaaggcttaccaagatgagataaatgct
gctctgggtgagcagctatctgctgaggatgaggaggctgttatggctgaatttgagaac
ttggaagcacagcttgccgttgagtctctaccagatgctccagttactgaagtacggcct
gaggagaaatcagaaacacctgctgtcactgaggctgcagaagacattgacgaggttatt
gagcttcctgatgtacccactaaggcaccagagagaccagaagctgcagaaaaaacaaaa
gttttggaagaacccctacctgcatag
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