KEGG   Oryza sativa japonica (Japanese rice): 4329903
Entry
4329903           CDS       T01015                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4329903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4329903
   03041 Spliceosome [BR:osa03041]
    4329903
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     4329903
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     4329903
Spliceosome [BR:osa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    4329903
SSDB
Motif
Pfam: RRM_1 RRM_7 RBD_RDR6
Other DBs
NCBI-GeneID: 4329903
NCBI-ProteinID: XP_015627228
LinkDB
Position
2:join(24064478..24065621,24066067..24066080)
AA seq 385 aa
MARKRKRGRTRRATQAEAEVEQSEREMVGDEAVEEEEDDDVTKMNPPPATAGEREEEEEE
EGIEGLLEPFTRNELLDLLVEACLRNPALRSRLAATAESDAAHRRLFVHGLSPGVTAAAM
AAAFAPFGALDECHAVADRATGRCRGYGFVTFRRRSAARRALAADASSRLAVGGRPVACQ
LASLGPTSPDRKLFVDNVPARAAHDELRRLFSRFGEIEAGPLGADRATGQFRGYAIFFYK
YPEGLTKALEERKVVFDGCELHCRRAHRVNKEKHLMTMPADAGAQSNGFENAASPIIHVQ
PKELALASTTQTPLGSNRPVEMMAKGPRSGTVPFRQNAGAGLLGACPVATVTSSTPDQST
PVSHSGASISTPRTAQRLAKSGAQG
NT seq 1158 nt   +upstreamnt  +downstreamnt
atggctcggaagaggaagcgggggcggacgcggcgcgccacgcaggcggaggcggaagtg
gagcaatccgagcgagaaatggtaggggatgaagccgtggaggaggaggaggacgacgac
gtcacgaagatgaatccgccgccggcgacggccggtgagcgcgaggaggaggaggaggag
gaaggaatcgaggggcttctggagccgttcaccaggaacgagctcctcgacctcctggtc
gaggcctgcctccggaaccccgccctgcgctcccgcctcgccgccaccgcggagtccgac
gccgcccaccgccgcctcttcgtgcacggcctcagccccggcgtcaccgccgccgcgatg
gccgccgccttcgcccccttcggcgcgctcgacgagtgccacgccgtcgccgaccgcgcc
accggccgctgccgcggctacggattcgtcaccttccgccgccgctccgccgcgcgccgc
gcgctcgccgccgacgcctcctctaggctcgccgtgggcggccgccccgtcgcgtgccag
ctcgcgtcgctcggccccacctcccccgaccgcaagctcttcgtggacaacgtgcccgcg
cgcgccgcccacgacgagctgaggaggctcttctccaggttcggggagatcgaggcgggg
cctctcggcgccgaccgcgccaccggccagttccgcggctacgccatcttcttctacaag
taccccgaggggcttacgaaggctctcgaggagcgcaaggtggtgttcgacgggtgcgag
ctccattgccggcgcgctcacagagtgaacaaggagaagcatctcatgaccatgcctgca
gatgcaggggcacagagcaatggcttcgagaacgctgcctcacccatcatccatgtccag
ccgaaggagcttgcattggcatccaccacgcagacgcctcttggatcaaatcggccagtt
gagatgatggcgaaggggcctagatcaggcacggttccctttcgtcagaacgctggagct
ggtctcttgggtgcatgccctgtggctacggtcacgtcctctacgccagatcagagcaca
ccggttagccattctggagcttcaatttccacaccccggactgctcagagattggctaaa
tcaggagcacaaggatga

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