KEGG   Oryza sativa japonica (Japanese rice): 4329991
Entry
4329991           CDS       T01015                                 
Name
(RefSeq) CLIP-associated protein
  KO
K16578  CLIP-associating protein 1/2
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4329991
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:osa04812]
    4329991
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     4329991
Cytoskeleton proteins [BR:osa04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      4329991
SSDB
Motif
Pfam: CLASP_N CEP104-like_TOG HEAT_EF3_N XMAP215_CLASP_TOG HEAT HEAT_EZ TOR1L1_N Vac14_Fab1_bd PDS5 Adaptin_N TTI1 UTP20 INTS1_R4 V-ATPase_H_N Tti2 ParcG Sec7-like_HUS MMS19_N HEAT_DAAF5 MMS19_C Dopey_N EF-hand_PLCG2
Other DBs
NCBI-GeneID: 4329991
NCBI-ProteinID: XP_015626414
UniProt: B9F137
LinkDB
Position
2:complement(join(24971843..24972001,24972868..24972969,24973443..24973511,24973629..24973697,24973763..24973837,24973919..24974023,24974644..24974742,24974856..24976639,24976772..24977123,24978083..24978181,24978297..24978414,24978501..24978586,24978669..24978737,24978829..24978903,24979081..24979178,24979708..24979869,24980885..24981047,24981207..24981275,24982055..24982117,24982217..24982372,24984230..24984565))
AA seq 1435 aa
MEAALEAARAKDTKQRLAGVERLHEALEAAARRGLTSAEVTSLVDACMDLTKDGNFRVAQ
GGLQALSAAAVLAGDHFKIHLNALVPAAVERLGDGKQPVRDAARQLLVTLMEVSSPTIIV
ERAGSYAWTHKSWRVREEFVRTVATAVGLFASTELPLQRVLLSPVLQLLNDLNQSVRDAA
ISCIEEMYRNMGSQFHEELQRHNLPSYMLKDINSRLDKIEPKARSSDGARMQYKVIERSV
SANAKRGSPRKKSSTRESTLFGGDSDITEKPVEPIRVHSEKELLREMEKIASALDPEKDW
SIRIAAMQRIEALVYGGAIDYPSFLTLLKQLVPPLSAQLSDRRSSIVKQACHLLNMLSKE
LLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTILRNCKVSRILPLIADTAKNDRS
AILRARCSEYAILILEYWADAPEIQRASDIYEDLIKCCVADAMSEVRATARSCYRMFTKT
WPERSRRLFMSFDPAVQRIINDEDGGLQKRYPSPSLREKGVQLSHASSHASGTHLAGYST
SAIVAMDKSAAISSESSLSSRSLLSQSKKIGRTAERSIESVLSSSKQKVSAIESLLKGVS
GRQNFSAMRSTSLDLGVDPPSSRDPPIPLAATASDHLSLQNSILLDSSLPSINNTRNGGS
RLVDTVNPHVANKERSRSPYLSSLSSESISGSSLPYARSSSGRSPYGSTMEESNDTWSTR
RMPQMQMDRHYLDMTYRDASHRNLHNHQVPHFQRPLRKQVASRTSASSRHSFDDGHISSN
DMSRYTDGPTSISDALSGGLSASSDWVARVTAFNFIQTLLQQGQKGIQEVMQNFEKVMKL
FFRYLDDPHHKVAQAAFSTLADIIPACKKQFESYVERILPYVFSRLIDPKELVRQPCSST
LEVVGRTYPIDTLLPALVRSLDEQRSPKAKLAVLEFANKSFSRYKVDSEGYSNSGFLKLW
LSKLAPLIHEKNAKLKETSISGIIAVYSHFDSTAVLNFILNLSIEEQNLVRRALKQYTPR
IEVDLVNYLQSKKERSRPKSYDQVDFGNSSEDGYALTPKSSYAFGRFSASSLDNASGKKM
NMVHGSIFLDISTGRTSSDVSIDNVKQCFKPEAEVLATSRESKNIARTVVEAARSWTDYP
GKSDATIDDENSTGTPRLEFGRLAVSDGRGAVISTSVEDAQEGNPLVELSSVKITPHTSN
GPSIPQLIHQISNVSEVTSLDKREALQQLVTASTNNDNSIWTKYFNQILTTILEVLDDSD
SSIRELSLSLVAEMLHNQKDPMEESIEIVLEKLLHVTKDVVAKVSNEANQCLNVVLAKYD
PFRCLAVIVPLLVSDDEKMLVVCTNCLTKLVGRLSEEELMTQLPSFLPALFDAFNNQSPD
VRKTVVFCLVDIYIMLGKAFVPYLEGLNSTQLRLVTIYANRISQARSGAPIDANH
NT seq 4308 nt   +upstreamnt  +downstreamnt
atggaggcggcgctggaggcggcgcgcgccaaggacacgaagcagcggctggccggggtg
gagcggctccacgaggcgctggaggccgcggcgaggcgagggctgacgtcggccgaggtg
acgtcgctggtcgacgcctgcatggatctgaccaaggacggcaacttccgcgtcgcccag
ggcggcctgcaggcgctctccgccgccgcggtgctcgccggcgaccacttcaagatccac
ctcaacgccctcgtgcccgccgccgtcgagcggctgggcgacggcaagcagcccgtccga
gacgccgccaggcagctgcttgtcaccctcatggaggtttcatcaccgacaatcattgtt
gaaagagctggaagttatgcatggactcacaagagctggagggtgcgggaagaatttgta
cgcactgttgcaacagctgttggcctctttgcttctacagagctccctctacagcgagtg
ttgctttcacctgtcctgcaattgctgaacgatttgaatcaaagtgttagagacgctgca
atctcatgtattgaggagatgtatagaaacatgggatctcaattccatgaagagttgcag
cgccataatctgccttcttacatgctgaaggacataaattcaagattggataaaatagaa
ccaaaggctcgctcatctgatggtgctagaatgcaatataaggttattgaaagatctgta
agtgctaatgcaaaaagaggcagtccaaggaaaaaaagttcaacaagggaaagcacatta
tttggaggtgactcagatattaccgaaaaaccagtggaacccataagagtacattcagag
aaagaattacttagggagatggagaagattgcatctgcccttgatccagaaaaggactgg
tctatacgtattgccgcaatgcaaaggattgaagccttggtatatggaggtgcaattgat
tatccatcatttcttacgctcctgaagcagctagttcctcccttatctgctcagctgtct
gaccgacggtctagcatagtaaaacaggcatgccatctacttaatatgctatcaaaagaa
ctccttggtgattttgaagcatgtgctgaaatatttattccggtacttttcaagcttgtt
gtgataactgtgcttgttattgctgaatccgccgacaactgcataaaaactatcctgcgg
aactgcaaggtttcacgtattcttccacttatagctgacacggcaaagaatgatcgcagc
gctatccttcgtgctagatgtagtgagtatgccatcctaatattggaatattgggcagat
gctcctgaaatacagcgtgcatctgatatatacgaagatctaataaaatgctgtgtggct
gatgcaatgagtgaggtccgtgcaactgcaagatcttgctataggatgttcaccaagaca
tggcctgagcgctcacgtcggctttttatgtcatttgatcctgcagtacaaaggataata
aatgatgaagacgggggcctgcagaaacggtatccttctccatcattgcgtgagaagggt
gtccaactttctcatgcttcatctcatgcaagtggtacacatttagccggatacagcact
tcagctattgttgcgatggacaagagtgcagctatttcttctgaatcatctctttcgtca
agaagtcttctgtcgcagtcaaagaaaataggtagaactgctgaaagaagcatagagagc
gttctcagttcaagtaaacaaaaggtttctgccattgaaagtttattgaagggtgtaagc
ggccggcaaaatttctcagctatgcgctcaacaagcttggatcttggagttgatcctcca
tcctctcgtgatcctcctatcccacttgctgcaactgcttcggaccatctgtctttgcag
aattccatattgctggattcatccctgccaagcattaataacacaagaaatggtggttca
cgcttggtagatacagtgaaccctcatgtggccaataaagagaggtcaaggtcaccatat
ttgagtagtctgtcgtctgaatcaatatcaggatcgtcactgccttatgcgagaagctct
tctgggaggtctccatatggtagcactatggaagagagtaatgatacatggtcaaccagg
cggatgccacaaatgcagatggacagacactatcttgatatgacctatagggatgccagc
cacagaaatttacacaatcaccaagttccacacttccagaggcctcttaggaagcaagtg
gcatcaaggacatctgcaagttcgagacacagttttgatgatggccatatctcatctaat
gacatgtcgcgatacacagatggtccaacttctataagcgatgcactctctgggggtctt
agtgcaagttcagactgggtagctagagttacagcctttaattttattcagacactactg
caacaaggacagaaaggcattcaagaagttatgcagaattttgaaaaggtcatgaagtta
tttttccgttatttggatgatcctcatcacaaagttgcacaggcagctttctctacactt
gcagatattattccagcttgcaagaagcaatttgagagctatgttgaaagaattttaccg
tatgtattttcaagacttattgatccaaaggaattagttaggcaaccatgttcatcaacc
ttggaagttgttggccgcacatatcccattgacacattgctacctgctctagtacgttca
ctggatgaacaaaggtctccaaaagcaaaactggctgttcttgagtttgctaataagtca
ttcagcaggtacaaagtagactcagaaggttatagtaacagtggctttcttaagctatgg
ctttcaaagctagcacctttaatacatgaaaagaatgcaaagttgaaggaaacttccatt
tctggaatcatagcagtttattctcattttgactcaacagcggttctaaattttatttta
aatttgtctattgaagaacaaaaccttgtgaggcgagcactgaagcaatatactcctcgt
atcgaggtcgatctggtaaattacttgcagagcaaaaaagaacgttcacgtcccaaatct
tatgaccaagttgattttggaaattcttctgaagatggttatgcactgacaccaaagagt
agttatgcatttgggcggttttctgctagttcccttgataatgcatcagggaagaagatg
aatatggttcatggatcaatattccttgatatttctactggccgaacatcctctgatgtc
agcattgataatgttaagcaatgtttcaaacctgaagctgaagttcttgcaacaagtagg
gaatcaaagaacattgctcgcacagttgtagaagctgcacgttcatggacagactatcct
ggaaaatcagatgctaccattgatgatgaaaattctactggtactcctcgtctggagttt
ggtcgtcttgctgtttctgatggacgtggtgctgttatttcaacttctgtggaagacgct
caagagggaaatccacttgtggagcttagttctgtgaagattaccccacacaccagtaat
ggccctagcatcccacaacttattcatcagataagcaatgtcagtgaagttactagtcta
gacaagcgggaggcattacaacagttggttacagcttccaccaataatgacaactctata
tggactaagtatttcaatcaaattttaacaaccatccttgaggtgttggatgactcggat
tcttctatcagggagctttctctatcgttagttgctgagatgctccacaaccagaaagat
cctatggaagaatccattgagattgtccttgaaaagctcctacatgtgaccaaggatgtc
gtggcgaaggtttcaaatgaagcaaaccagtgcttaaatgtcgtgttggcaaaatatgat
ccttttagatgccttgctgttattgtacctttgttggttagtgatgatgaaaagatgctt
gtcgtgtgtaccaactgtttgacaaagcttgttggacgcctatcagaggaggaattaatg
actcaactgccttcatttttaccagcactttttgatgctttcaataaccagagtccagat
gttcgcaagactgttgtattctgcttggtggatatctacattatgcttgggaaagcattt
gtaccatatctagaggggcttaatagcacgcagctgcgcctagtaacaatctatgcaaac
aggatatcacaggcaaggtctggtgcaccgattgatgctaaccactag

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