KEGG T01015: 4330068

Oryza sativa japonica (Japanese rice): 4330068

Entry

4330068           CDS       T01015

Symbol

OsRPA32-2, OsRPA32B, RPA2B, RPA32B

Name

(RefSeq) replication protein A 32 kDa subunit B

K10739

replication factor A2

Organism

osa Oryza sativa japonica (Japanese rice)

Pathway

osa03030

DNA replication

osa03420

Nucleotide excision repair

osa03430

Mismatch repair

osa03440

Homologous recombination

osa03460

Fanconi anemia pathway

Brite

KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    4330068 (OsRPA32-2)
   03420 Nucleotide excision repair
    4330068 (OsRPA32-2)
   03430 Mismatch repair
    4330068 (OsRPA32-2)
   03440 Homologous recombination
    4330068 (OsRPA32-2)
   03460 Fanconi anemia pathway
    4330068 (OsRPA32-2)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osa03032]
    4330068 (OsRPA32-2)
   03400 DNA repair and recombination proteins [BR:osa03400]
    4330068 (OsRPA32-2)
DNA replication proteins [BR:osa03032]
Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    4330068 (OsRPA32-2)
DNA repair and recombination proteins [BR:osa03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     4330068 (OsRPA32-2)
   MMR (mismatch excision repair)
     4330068 (OsRPA32-2)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     4330068 (OsRPA32-2)

SSDB

Motif

Pfam:

RPA_C tRNA_anti-codon RMI2 SnoaL_4 PCI

Other DBs

NCBI-GeneID:

4330068

NCBI-ProteinID:

NP_001403681

LinkDB

Position

2:complement(join(25891082..25891166,25891237..25891305,25891965..25892053,25892137..25892229,25892338..25892416,25893379..25893456,25893543..25893584,25893669..25893766,25894191..25894301,25894410..25894562))

AA seq 298 aa
MYGVGVGGGGGGNYDGGGGNASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLP
LTVKQIMDASQTNDDKSNFAVNGMEVSTVRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNR
WENDSTDTKEMADIQNGDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVH
LELTRPKSQVNANTATGTPNQTMPRDSMAYNQSPLTNQASTFSAPQNTGTGTNMIDLVLN
VFHDPAVMNDDHGVGVDYVSRRLNLPEETVGKIIIDQVDLGHLYATIDDHHYKSTMNG

NT seq 897 nt +upstreamnt +downstreamnt
atgtacggcgtcggcgtcggcggcggcggcggcgggaactacgatggcgggggagggaac
gccagctccctcttcggcggcggcggattcatgccctcgcaggcgaccaacgccgcggag
gggaccagcggcggcggcggcggcttccccaagagtcggaacgcccaggcgctgctcccg
ctcaccgtgaagcagatcatggacgcgtcccagaccaacgacgacaagtcgaattttgct
gtcaatggcatggaggtgtccacggttaggcttgtaggacgcatgttaaataagcttgat
cgggttacggatgtatcattcactcttgatgatggtacaggcagggtacctgtgaatcgc
tgggaaaacgatagcactgatactaaggagatggctgacattcagaatggtgactatgtt
attgtcaatggtggtctaaaaggttttcaagggaagcgtcaggtggttgcttactctgtg
aggcgtataaccaacttcaatgatgtaacacatcactttcttcactgcgttcatgtgcac
ttggagcttaccaggccgaagtcccaagtaaatgctaatacagcaacaggaactcctaac
caaactatgcctagggatagcatggcgtataaccaaagtccacttactaatcaggcctca
acattttctgcaccacaaaatactggtactggaacaaatatgatcgacttggtcttgaat
gtttttcatgacccagcagttatgaatgatgaccatggagtaggcgtagattatgtgagc
cgtcgtcttaatctaccagaggaaacagtcgggaaaatcattatagaccaagttgatctg
ggacatttgtatgccactatcgatgaccaccattacaagtccacaatgaatggttga

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