Oryza sativa japonica (Japanese rice): 4330084
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Entry
4330084 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4330084
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
4330084
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_RPS2
LRR_At1g61320_AtMIF1
F-box_5
LRR_8
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
4330084
NCBI-ProteinID:
XP_015622985
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All DBs
Position
2:complement(join(26001206..26002110,26003236..26003587))
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AA seq
418 aa
AA seq
DB search
MSAASSSGAGGALINDVLTDDVLRAVLARLVPEAERDAFGLVCRRWLRIQSSDRRRLRAR
AGPAMLRRLAARFPGILELDLSQSPSRSFYPGVIDDDLDVVAGGFRNLRVLALQNCKGVT
DVGMAKIGDRLPSLQSIDVSHCRKLSDKGLKAVLLGCQNLRQLVIAGCRLITDNLLIALS
KSCIHLEDLVAAGCNNITDAGISGLADGCHKMKSLDMSKCNKVGDPGVCKFAEVSSSSLV
SLKLLDCNKVGDKSIHALAKFCHNLETLVIGGCRDVTDASIEALAFACYSRLKCLRMDWC
LKITDSSLRSLLSNCKLLVAIDVGCCDQITDAAFQDMDANGFQSALRLLKISSCVRITVA
GVRNVIESCMALEHLDVRSCPQVTRQSCEQAGLQFPGSCKVNFEGSLSESDPSVAIFF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcatcgtcgagcggcgccggcggcgccctcatcaacgacgtgctcaccgac
gacgtgctccgcgcggtgctggcgcggctggtgcccgaggcggagcgggacgcgttcggg
ctcgtgtgccgccgctggctccggatccagagctccgatcggcggcgcctgcgcgcgcgc
gccggcccggccatgctgcgccgcctcgctgcgcgcttccccgggatcctcgagctggac
ctctcccagtcgccgtcccgctcgttctaccccggcgtcatcgacgacgacctggacgtc
gtcgccgggggcttccgcaatctgcgcgtcctcgctctgcagaattgcaaaggtgtaact
gatgttggaatggcaaaaataggagatagactgccctctctgcaatccatagatgtttcc
cactgcagaaagcttagtgacaaaggtctaaaggcagttttactggggtgtcaaaacttg
aggcagctggtcattgctggttgcagattaataactgataatttgttgattgctctatca
aaaagttgcatacatttggaagatcttgtggctgcaggatgtaacaacataacagatgca
gggatctcaggtctagctgatggttgtcacaagatgaagtcactagacatgagcaaatgc
aataaagtcggggatcctggagtctgtaaatttgctgaggtctcttcatcgtcattggta
tcattaaaactgttggattgcaacaaagtgggtgataagtccatacatgcactagctaag
ttctgccataacctggagacactcgtcattggtggatgtcgtgatgttactgatgcgtcc
atagaagcactggcttttgcctgctatagcagactaaagtgcttaagaatggattggtgc
ttgaagataacagactcctcactgagaagtctattgtctaactgtaaacttcttgtggct
attgatgtggggtgctgtgaccaaattacagatgcagcatttcaggatatggatgcaaat
ggatttcaatctgcactgagacttctgaagatcagcagctgtgttaggatcacagttgca
ggagtcaggaatgtgatcgaatcctgtatggcccttgagcacctagatgttcggtcatgc
cctcaggtcacaaggcagagctgtgagcaagctgggctgcaatttcctggtagctgcaag
gtaaactttgaaggcagcttatctgagtctgatccatctgttgctatattcttttag
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