Oryza sativa japonica (Japanese rice) (RefSeq): 4330097
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Entry
4330097 CDS
T01015
Name
(RefSeq) ALG-2 interacting protein X
KO
K12200
programmed cell death 6-interacting protein
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03250
Viral life cycle - HIV-1
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
4330097
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4330097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4330097
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4330097
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
4330097
Exosome [BR:
osa04147
]
Exosomal proteins
Proteins found in most exosomes
4330097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
Motif
Other DBs
NCBI-GeneID:
4330097
NCBI-ProteinID:
XP_015627620
UniProt:
Q6H7F8
Q6H5V3
LinkDB
All DBs
Position
2:complement(25592004..25595230)
Genome browser
AA seq
353 aa
AA seq
DB search
MSRPPSPMLSVPEKKTAATELFRDRHFFNSAFFTDLREARASLSAPSSQATTQDAASRRA
LLLRYHRLLASARDDPCDFDDDLAFTWHDAFRPHLRRTAASLRFEKAAVVFNVGAASSRI
AAAVDRAAVGGVKAACGEFQRAAGAFRAAGEMMEGEEEDTEDTVDMGPEASAMLERLMLA
QAQECCFERALAAGTSSAACSKVAKQAALYYEEAYASLVIPPLQNHFERSWVAHILLKAA
LFNAEASYHYAIELHEKTEIGEEIARLQFGINAIVDAKKAVRGAPGSLYDAASRLEQDMN
QNLERALNENNRIYLLRVPAAKLLAPLPAASLVRSASLSEILDVKTETGNQSS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggccgccgtcgccgatgctctccgtcccggagaagaagacggccgccaccgag
ctcttccgggaccgccacttcttcaactcggccttcttcaccgacctccgggaggcacgc
gcttccctctccgctccgagctcccaggcgacgacccaggacgccgcctcccgccgcgcg
ctcctactccggtaccaccgcctcctcgcctccgcgcgcgacgacccctgcgacttcgac
gacgacctcgccttcacctggcacgacgccttcaggccccacctcaggcgcaccgcggcg
tccctccgcttcgagaaggccgccgtcgtgttcaacgtcggcgccgcctcgtcgaggatc
gcggcggccgtcgaccgggcggcggtgggcggggtcaaggctgcgtgcggggagttccag
cgcgccgcgggggcgttcagagcggcgggggagatgatggagggggaggaggaggacacg
gaggacacggtggatatgggccccgaggcctccgcgatgctggagcggctcatgctcgcg
caggcgcaggagtgctgcttcgagcgcgctctcgccgcggggacgtcgtcagcggcttgc
tccaaggtcgccaagcaggctgccttgtattatgaagaagcttatgcttcactggttatc
cctccactacaaaaccactttgagagatcttgggtagcacacatcctgttaaaggctgct
ctattcaatgcagaagctagctatcactatgctattgaactgcatgagaaaacagaaatc
ggtgaagagatagctcgattacagtttggaattaatgcaattgtcgatgcaaagaaagct
gtccgtggagccccaggatccctttatgatgctgcctccagactcgaacaagatatgaac
cagaacttggagagagcactgaatgagaacaaccgcatctatcttctgcgagtcccagca
gccaaactactagctcctctgccagcagcttcacttgtccggtctgcttccctgagtgag
atcttagatgtgaagacagaaaccggtaatcaatcatcgtaa
Oryza sativa japonica (Japanese rice) (RefSeq): 4348999
Help
Entry
4348999 CDS
T01015
Name
(RefSeq) ALG-2 interacting protein X
KO
K12200
programmed cell death 6-interacting protein
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03250
Viral life cycle - HIV-1
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
4348999
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4348999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4348999
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4348999
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
4348999
Exosome [BR:
osa04147
]
Exosomal proteins
Proteins found in most exosomes
4348999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
zf-C4H2
Pheromone
Motif
Other DBs
NCBI-GeneID:
4348999
NCBI-ProteinID:
XP_015613589
UniProt:
Q8LNU2
A0A0P0XVQ5
LinkDB
All DBs
Position
10:complement(18837745..18843228)
Genome browser
AA seq
883 aa
AA seq
DB search
MSSAANVMLAIHEKRTTPTDLYRPLRLYIASAYSEREAAAADDDLAAVRDLRADVEQPSL
PDPSSLERRRDALLAYARALSLVEPRFPISSDRAHVHSLAFTWHDAFKTGKKASVASIHL
EKAAVLFNLAAVYSQIALAADRATDVGIRTACGSFQSAAGAFAWMRESGVAAKAVAAGAT
TVDVTPECAAMLEKLMLAQAQECFFEKVIAGGKPPALCSKVARQVGIFYEEAYAALSAAP
LSQHFDKTWVSHVQLKAAQFYADACYRCSLDLHEKEEIAQEIARLKIGISALADAKKVAR
GVAAPLLDSVNKLESNMKTNLERAMKENDRVYLMRVPDASSLGALPAASLVKPTSLAEVL
DASKERLFSSLVPDGSMKALSKYTEMVDNIIRTQAEKLQQASEITRVRLKEMDLPDSILS
LEGNITLPLDLKEDVEAVQISGGPAGLEAELQQLRDLSRVNQELLVQTEEMLQKEANEDA
QFRTQFGSRWTRPQSSTLTKNIQDRLNLFASNLKTAGDSDSQIERGLKESYPLISILDRR
PIESALPSISRPIMSLDGNEDAIVGALKQSLRQLESLGAQRAGLEDMLKEMKRKDDILPK
LMAGVGSHDDLFKKEISKYDPVCAEIADNIVAQEQLLLQIQAQNEQFAAVFNLEDYKVAR
ERCYKQIAAAVAKYRDIKKNINEGLNFYVTLQEAIGKIKQQCSDFIMTRNIQCREMIEDV
QKKLAGFSFSSSSSQASMQRNTSVPPDQNSPSPPPPSSHAPHAQGPYGVPPGGDSRPGYS
QPEQRPAYSQPYPPYGAPPQQPPYGAPSQQPPYGAPHPGHYQQPPHQQPPNHDYGQQAYP
GGWRGQYYNPHQPQPQPQPPYPQPPYNAQGSYPPHQSSYYRPQ
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcggcgaacgtgatgctggcgatccacgagaagaggaccacccccaccgac
ctctaccgcccgctccgcctctacatcgcctccgcctactcggagcgggaggcggccgcg
gccgacgacgacctcgccgcggtgcgcgacctgcgcgccgacgtcgagcagccgtcgctc
ccggacccgtcctccctcgagcgaaggcgggacgcgctcctcgcctacgcgcgcgccctg
tccctcgtcgagccccgcttccccatctcctccgaccgcgcccacgtccactccctcgcc
ttcacctggcacgacgccttcaagaccggcaagaaggccagcgtcgcctccatccacctc
gagaaggccgccgtgctcttcaacctcgccgccgtctactcccagatcgcgctcgccgcg
gaccgggccaccgacgtcgggatcaggaccgcgtgcggctcgttccagagcgcggcgggg
gcgttcgcgtggatgagggagagcggcgtcgccgccaaggccgtcgcggccggggccacc
accgtcgacgtcacccccgagtgcgccgccatgctggagaagctcatgctcgcgcaggcg
caggagtgcttcttcgagaaggtgatagccggtgggaagccgcccgcgctgtgctccaag
gttgcccggcaggtgggcatattctatgaagaagcctatgcagctcttagcgcagctcct
ctcagtcagcactttgataagacatgggtttctcatgtccagctgaaggcagctcagttc
tatgctgatgcttgctataggtgttctttggatcttcacgagaaagaagaaattgcacag
gaaattgcacgtctgaagattggaattagcgctttggcagatgccaagaaggtggccagg
ggagttgctgccccacttcttgattctgttaataagctggagagtaatatgaagaccaac
ttggagagggctatgaaagagaatgaccgtgtttatctgatgagggttccggatgctagt
tctcttggcgcgctccctgcagcatcacttgtaaagcctacatctttggctgaagttcta
gatgctagcaaagagaggcttttttcatcacttgtgcctgatggaagcatgaaagcactt
tccaagtacactgagatggtagataacatcatcaggactcaagcggagaaattacagcaa
gctagtgagatcactagagttaggttgaaggaaatggacttgcccgattccattctttca
ttagaaggtaatatcaccttacctttagatttgaaggaagacgttgaggctgttcagata
agcggaggccctgctggattggaagcggagttgcagcagcttagggatttaagcagagtc
aatcaggaattacttgttcagaccgaagagatgctgcagaaggaggcgaatgaagatgct
cagtttcggacgcaattcgggagtcgttggactagacctcaatctagcaccctaacaaaa
aacattcaagaccgattgaatctgtttgcttctaatcttaagacagctggtgatagtgat
tctcagattgagcgaggtttgaaggagagctatccattgatatctattcttgacagaaga
ccgatagagtctgcactaccgagtatttctaggcctattatgtccttggatgggaatgag
gatgctattgttggagcccttaaacaaagcttgaggcaactagaatctctaggagcacag
agagcaggtcttgaagacatgcttaaagaaatgaagagaaaggatgacatactccctaaa
ttgatggccggtgttggatcacacgatgatctttttaagaaggagatttcaaagtatgat
cctgtctgtgctgagatagctgataacattgtggcgcaagaacaactgctgctacaaata
caggcacaaaatgaacagtttgctgcggtgttcaacctagaggattacaaagttgctcgt
gagagatgttacaagcaaattgctgcggctgttgctaaataccgagatattaagaagaac
attaatgaaggcctcaatttttatgtgacattacaggaagcaattggcaaaataaagcag
cagtgcagtgacttcataatgacccgaaacattcaatgccgtgaaatgatcgaagatgtg
cagaagaagctagcaggtttcagcttctcatcttcttccagccaagcaagcatgcagagg
aatacttctgtgccaccagatcagaacagtccatcaccaccaccaccgtcgtcgcatgct
ccccatgctcagggcccatatggtgttccacccggaggcgattcaagacccgggtactct
cagcccgagcaaagacctgcttactcacagccatacccgccctatggcgcgccaccgcaa
cagcctccatatggtgcgccgtcgcaacagccaccttatggcgcgccccaccctggtcac
taccaacagccaccacaccagcaacctcccaaccatgactatggccaacaagcatatcct
ggaggatggcgcgggcagtactacaatccacatcagccacagccgcagccacagccgcca
tatcctcagccaccgtacaatgcccagggttcttaccctcctcaccagagcagctactac
aggcctcaatga
DBGET
integrated database retrieval system
