KEGG   Oryza sativa japonica (Japanese rice): 4330186
Entry
4330186           CDS       T01015                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    4330186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osa03021]
    4330186
   03036 Chromosome and associated proteins [BR:osa03036]
    4330186
Transcription machinery [BR:osa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     4330186
   Coactivators
    SAGA/TFTC/STAGA complex
     4330186
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     4330186
SSDB
Motif
Pfam: TAF4 RST
Other DBs
NCBI-GeneID: 4330186
NCBI-ProteinID: XP_015626016
UniProt: A0A0P0VMB8 Q6H7I0
LinkDB
Position
2:complement(join(26883175..26883350,26883447..26883696,26883765..26883830,26884313..26884456,26884539..26884595,26884669..26884724,26884822..26884957,26885046..26885133,26885235..26885338,26886371..26887036,26887193..26887288,26887830..26888177))
AA seq 728 aa
MSTQLTEHDHQPEQEPPHSENHLKQAEPNSFQFAEKETGYAGLQNFTGPKVDVGQTSGEQ
QHVKQMVGQQAPPGAQDARKRGYQPSIPFNMLIPILQAHLDRDKDMQLQTVWAKLRRNEV
HKDDFLRVIRNIVGDQMLKQAAHKVFAQMQAQAQRSGQANANQQANANQYSLQSQVSSSG
SAQLHDQQVHVSTTPNQGQKNQALSSSQTFVQSGTQVQSSMTAHDNSIQRPDAKGMHVTP
NRPPVMNSAISAQTMNKQQQPTQVQQASQQIYGTTNRPDQPYTRPIGGSTPLSSLSSESE
IRPSSHPAKMEILPSHPMTQQNAAAQQMQQNKDVKTNASNPRSNAKQDSGTGKGRAVGTG
GSSTKSQGKQGPPNFSTPPAAKSNKKTAGQKKSLETSGSTPPPPSKKQKTSGTFQEQSFD
QLNDVTAVSGVNLREEEEQLLSAPKEESWASEEARKIAQEEDGKLFLQKGPLLKKLAAIV
PKCNLKSIGGDVEHCLSMCVEERLRRFISTLIRVSKQRIDTEKSGHQLVITSDVGRQILR
MNQKAKEEWDKKQAEETDKNKKQNEVDGGGTVELDKEKEETRSKNAKPNKEEDDKMRTTA
ANVAARQAVGGSDMLSKWQLMAEQARQKREGLDLAASSQRGTASRSHMAGKGPTDHHEAS
KRTHSAAFGTGGMNRQGRGPFAASHPKGPQRTISMKDVICVLEREPQMTKSRLIYRLYER
LPGDSTRD
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgtctacccaattaacggaacacgatcaccagccagaacaagaaccaccacattctgaa
aaccatctgaaacaggcagagccaaacagcttccagttcgctgaaaaggaaacaggctat
gctggtctacagaatttcacaggccccaaggtggatgtgggtcagacttcaggagagcag
cagcatgtaaaacagatggtcggtcagcaagcaccacctggtgcacaggacgcaaggaag
cggggataccaaccgtctataccatttaatatgttgattccaatcctacaggctcatctt
gacagagacaaggatatgcagcttcaaactgtgtgggcaaaacttaggcgtaatgaagtt
cataaagatgatttcttgagagttatcaggaacatcgttggagatcaaatgctaaagcaa
gcagcccataaagtttttgcacagatgcaagcccaggcacagagaagtggccaggcaaat
gcaaatcagcaggctaatgcaaatcagtattctttacaatcccaagtatcttccagcggt
tcagctcaattacatgatcagcaagttcacgtgtccaccacacctaatcagggccaaaaa
aaccaagcattgtcttcatcccaaacctttgtgcaatctggcactcaggtgcagagcagt
atgactgctcatgataattccatccaacggccagatgcaaagggaatgcatgttacgccg
aaccgacctcctgttatgaactcagcaatttctgcacaaacaatgaacaaacagcagcaa
cccacacaagtccagcaagcctcacagcaaatatatggaacaactaatcgccctgaccag
ccatacactaggccaatcggtggttcaacacctcttagctcactgagttcagaatcagaa
ataaggccttcctctcatcctgcaaaaatggagattcttccttctcatccaatgacacaa
caaaatgcagctgcgcagcaaatgcaacagaacaaggatgtgaagactaatgcttctaat
ccaaggagtaatgcaaagcaagattcggggacaggtaagggtcgtgcagttggcactgga
ggttcttcaacgaaatcgcaagggaagcagggcccccctaacttttccacacctcccgct
gcaaagagtaacaagaaaactgctgggcagaagaagtcattggaaacatcaggctctaca
ccaccccctcctagcaaaaagcagaagacttctggaaccttccaagaacaaagcttcgat
caactaaatgatgtcacggctgttagtggtgttaatcttagggaagaagaagaacagcta
ctctctgccccaaaggaagagagctgggcctcagaagaagcaaggaaaattgcacaggaa
gaagatggcaagctttttctgcagaaaggcccacttctgaagaaactagcagcaatcgtt
cctaaatgcaatttgaagagcattggtggtgatgttgagcattgtttatcaatgtgcgtg
gaggagcgattgcgaagatttatcagtactctcataagagtttcaaagcagagaattgac
acagaaaagtctggccatcaactagttataacatcagatgttggccggcaaattttgcgg
atgaaccagaaagctaaggaagaatgggataaaaaacaagcagaggaaacagacaagaac
aagaaacaaaatgaggttgacggcggtggcactgtggaattagacaaggaaaaggaggaa
actcgttcaaagaatgcaaagcccaacaaagaagaagatgacaagatgagaacaacagct
gcaaatgttgccgcccgacaggctgttggaggaagtgatatgctgtccaaatggcaactg
atggctgaacaagctagacagaaacgcgaaggccttgatctggctgcttcttcacagcgc
gggacagcttccaggtcgcatatggctgggaaaggtcccacagatcaccacgaagcttcg
aagaggacccattctgcagcgtttggaactggaggcatgaacaggcaaggcaggggtcca
tttgcagcgtctcatccaaaaggaccacaaagaactatttctatgaaggatgtaatatgt
gtcctcgagagggaacctcagatgacaaaatcgcggctgatatatcggctctatgagcgg
ttgcctggagattccaccagagattag

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