Oryza sativa japonica (Japanese rice): 4330262
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Entry
4330262 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osa03016
]
4330262
Enzymes [BR:
osa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
4330262
Transfer RNA biogenesis [BR:
osa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
4330262
Prokaryotic type
4330262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
4330262
NCBI-ProteinID:
XP_015623142
UniProt:
Q6ET86
Q6ESS0
LinkDB
All DBs
Position
2:join(27621001..27622406,27622499..27622838)
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AA seq
581 aa
AA seq
DB search
MAAASPPASPPHPKRRKMSSSSDPDQEPTSPSAAGADGAQPRAPRYKRRKVAILLGYCGA
GYQGMQKNPGARTIEGDLEEALYRAGAVPEADRAAPRRYDWARAARTDKGVSAAAQVVSG
RFYVDPPVFTDRLNAQLAPQIRAFGYVRVTNSFNAKKFCDRRRYVYLLPVFALDPSAHPD
REAVMASVGSGSELTKCLECSERGRKVPGVMGREGKVPDPALQEEKSVEASREEAAVGSN
EDANCDPASTGDRSVDLPIPDNETNTQITEMRSNGAEKCDVQLSGGTLCSEAVPASNSET
VCPILNSDSNTNSDSVDVDPSFVAEKKGSIETVVTEDGKKQAMDVVTEDEKKQDVDYEGS
SLEEMPLRSAFSYTHEVKERFNRILKKYVGTHNFHNFTTRTKAEDPAAKRFIISFAADRV
VNLDGIDFIRCEVVGQSFMLHQIRKMIGLAVAVMRNCAPESIYDVAFRKDVNLNVPTAPE
VGLYLDECMFTSYNKKWKDSHEAVSMEPYSEEAEEFKLKYIFPHIAAMEHKEGAVALWLH
SLNSRNYPDFRYMDNAGTEASIAAAVESVDEGTVPSDNISE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcgccaccggcctccccgcctcaccccaagcgccgcaagatgtcctcc
tcctccgaccccgaccaggagcccacctcgccttccgccgctggcgccgacggcgcgcag
ccccgcgccccccggtacaagcgtcgcaaggtggccatcctgctcggctactgcggcgcg
gggtaccagggcatgcagaagaacccgggcgcgcgcaccatcgagggggacctggaggag
gcgctctaccgggccggcgccgtgcccgaggccgaccgcgccgcgccccgccgctacgac
tgggcccgcgcggcgcgcaccgacaagggcgtcagcgccgcggcgcaggtcgtctccggc
cgcttctacgtcgacccgcccgtcttcactgatcgcctgaatgcgcagctcgcgccccag
atccgcgccttcggctacgtccgcgtcaccaactcgttcaacgcgaagaagttctgcgac
cgccggaggtatgtgtacctgctgcccgtgttcgcgctcgaccccagcgcgcaccccgac
cgtgaggccgtcatggcgagcgttgggagtgggagcgagcttacgaagtgccttgagtgc
tcagagaggggtaggaaggtgcccggtgtcatgggccgggagggtaaggtacccgatcct
gcccttcaggaggagaaatctgttgaggcttcccgggaggaagctgcagtgggttcaaat
gaggatgcaaattgtgatcctgcaagcactggcgatcgtagtgttgatttacctatccct
gataatgaaaccaatacccaaatcactgaaatgagatcaaatggtgcagaaaaatgtgat
gttcaactgtcaggtggtactctctgttctgaagctgtaccagctagcaatagtgagact
gtttgccccatcctgaattcagattccaacacgaattcagattcagttgatgttgatcct
tcatttgtggctgaaaagaaaggtagtattgagactgttgttactgaagatggaaagaaa
caagctatggatgttgttactgaagatgaaaagaaacaagatgtggattatgaaggcagc
agtctagaagagatgcccctgagaagtgcattttcttacactcatgaagtcaaagagagg
tttaatagaattctcaaaaaatatgttggaacacacaatttccacaacttcaccaccaga
actaaagcggaggatcctgcagccaaaaggttcatcatttcctttgctgctgatcgtgta
gtgaatttggatgggattgattttatcaggtgcgaggttgttgggcagagtttcatgctc
catcagattaggaagatgattggccttgctgttgctgtgatgaggaactgtgctcctgag
tcaatctatgatgtagcgttccgcaaggatgtcaatcttaatgtgcctactgcgcctgag
gttgggctgtacttagatgaatgcatgttcacttcatataacaagaaatggaaggattca
catgaggcggtttctatggaaccttattctgaggaggctgaagagtttaagctcaagtat
atattccctcatatcgctgcaatggagcacaaggagggagctgtagctctctggttgcat
tcgttgaacagcagaaattatccagattttcgctacatggataatgctggaactgaggca
agtattgctgctgcagttgagagtgttgatgaagggacggtgccaagtgataatattagt
gagtga
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