KEGG   Oryza sativa japonica (Japanese rice): 4330281
Entry
4330281           CDS       T01015                                 
Symbol
AGO1A, OsAGO1a
Name
(RefSeq) protein argonaute 1A
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4330281 (AGO1A)
   03036 Chromosome and associated proteins [BR:osa03036]
    4330281 (AGO1A)
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     4330281 (AGO1A)
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    4330281 (AGO1A)
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     4330281 (AGO1A)
   microRNA pathway
    RISC loading complex
     4330281 (AGO1A)
SSDB
Motif
Pfam: Piwi ArgoN PAZ Gly-rich_Ago1 ArgoL1 ArgoL2 ArgoMid
Other DBs
NCBI-GeneID: 4330281
NCBI-ProteinID: NP_001403746
LinkDB
Position
2:complement(join(27817048..27817262,27817362..27817393,27817490..27817584,27817684..27817757,27817870..27818005,27818085..27818148,27818226..27818288,27818370..27818512,27818636..27818773,27818862..27818983,27819063..27819228,27819346..27819468,27819679..27819750,27819843..27819950,27820551..27820667,27820797..27820935,27821044..27821150,27821237..27821346,27821962..27822095,27822176..27822325,27822399..27822619,27822717..27823396,27828067..27828106))
AA seq 1082 aa
MAFQLDNGYYSHQALAMMRKKKTEPRNAGESSGTQQATGAPGRGPSQRPERAQQHGGGGW
QPANPQYAQQAGRGGGQHQGRGGRYQGRGGPTSHQPGGGPVEYQAHEYYGRGVQRQGGMP
QHRSGSGGHGVPASPSRTVPELHQASQDQYQATVVAPSPSRTGPSSLPVEASSEEVQHQF
QELAIQGQSPTSQAIQPAPPSSKSVRFPMRPGKGTFGDRCIVKANHFFAELPDKDLHQYD
VSITPEVPSRGVNRAVIGEIVTQYRQSHLGGRLPVYDGRKSLYTAGPLPFTSRTFDVILQ
DEEESLAVGQGAQRRERPFKVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLREL
PTARYSPVARSFYSPNLGRRQQLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLP
VIDFVAQLLNRDISVRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATREL
SFPIDNHGTVKTVVQYFQETYGFNIKHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKR
LNEKQITALLKVTCQRPQERELDILQTVHHNAYHQDPYAQEFGIRIDERLASVEARVLPP
PWLKYHDSGREKDVLPRIGQWNMMNKKMVNGGRVNNWTCINFSRHVQDNAARSFCRELAI
MCQISGMDFSIDPVVPLVTARPEHVERALKARYQEAMNILKPQGGELDLLIAILPDNNGS
LYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIP
LVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLF
KVWKDPQRGTVSGGMIRELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLFYELDAIRKA
CASLEADYQPPVTFVVVQKRHHTRLFANNHKDQRTVDRSGNILPGTVVDSKICHPTEFDF
YLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHL
AAFRARFYMEPDTSDSGSMASGAHTRGGGPLPGARSTKPAGNVAVRPLPDLKENVKRVMF
YC
NT seq 3249 nt   +upstreamnt  +downstreamnt
atggccttccagttggacaacgggtactactcccatcaagctttagccatgatgagaaag
aaaaaaactgaaccccgtaatgctggggaaagttctggaactcaacaagccactggagct
cctggacggggtccttcacagcgacctgagagagctcaacagcatggaggtggtggttgg
caacctgccaatcctcaatatgctcaacaagctggtcgtggtggtggacaacaccaggga
cgtggtggacgttaccagggtcgtggagggccaacatcacatcaaccaggtggtggtccg
gttgaatatcaagcacatgagtactatggccgtggtgtccaacggcaaggaggaatgcca
caacacaggagtggcagtggtggacatggagttcctgccagtccatcaagaacagttccc
gagctgcaccaagcctcacaagaccagtaccaagctacggtggttgcaccatcaccatca
agaactggcccatcttcgctgcctgttgaggccagcagcgaagaagtccaacatcagttt
caggaacttgccatccagggtcaaagccccactagccaggccattcaaccagcaccacca
tcgagcaaatcagtgagatttccaatgcgccctggcaagggtacatttggtgataggtgc
atcgtgaaagccaaccatttctttgctgaattgcctgacaaagaccttcaccagtatgat
gtgtctataactcctgaggttccttcacgtggtgtcaatcgtgctgtcattggagaaatt
gtaacacaatataggcagtctcatttgggtggccgtcttccagtctatgatggaaggaag
agcttatacacagctggtccattaccatttacttctaggacctttgacgttattctgcag
gatgaggaagagagccttgctgttgggcaaggtgcacagaggcgtgagagaccatttaag
gtcgtgatcaaatttgctgcacgcgctgatctccaccatttagccatgtttttagctgga
aggcaagcggatgctcctcaagaagctcttcaagttcttgacattgttctacgtgaattg
cctactgcaaggtactctccagttgcaaggtcattttattcgcctaacttaggaaggcgc
caacaacttggcgagggcctggaaagttggcgtggtttttaccaaagcatacgacccacg
cagatgggactttctctgaatattgatatgtcatcgacagcattcattgagcctctacct
gtgattgactttgttgcacagcttttgaacagagacatctcagttagaccattatctgat
gctgatcgtgtgaagatcaagaaggccctaaggggtgtaaaggttgaggtcacacataga
ggcaatatgcgcaggaagtatcgcatttctggccttacctcgcaagcaacacgagagttg
tcttttcccattgataatcatggtactgtgaagacggtggtgcaatacttccaggagaca
tatggatttaacattaagcacacaactttgccttgcttgcaagtgggcaatcaacaaagg
ccaaattatctaccaatggaggtctgtaagattgtggagggacagcgttactcaaaaaga
ctaaatgagaagcagataactgctcttcttaaagtgacctgccagcgccctcaagagcgt
gagctggacattttgcagactgtgcatcacaatgcataccatcaggatccatatgcacag
gagtttggcataaggatcgatgagcgacttgcatctgttgaagctcgtgttctaccaccc
ccctggcttaagtaccacgatagtggcagagagaaggatgtcttgccaagaattggccaa
tggaatatgatgaataagaaaatggtcaatggtggtagagttaacaactggacatgcatc
aatttttctcgtcatgtccaagataatgctgctaggagtttctgtcgcgagcttgctatt
atgtgccaaatatctgggatggacttctcaattgatcctgtggttcctctagtgactgca
agacctgaacatgtggaaagagcgctcaaggcacgctatcaagaggccatgaatatactg
aaaccacagggcggggagcttgacctgctgattgcaatattgcctgacaataatggttct
ctttatggcgatctcaaaaggatatgtgagactgatcttggattggtctcgcaatgctgt
cttacgaagcatgtttttaagatgagcaaacagtatttagcaaacgttgcccttaaaatc
aatgttaaggtgggaggaagaaatacagtacttgttgatgctttgacaaggaggattccc
cttgtgagtgataggccaacgatcatttttggtgctgatgttacacatccccatcctgga
gaagattctagcccttccattgcagctgttgttgcttctcaagactggcctgaggtcacc
aaatatgccggattagtgagtgcacaggcccatcgtcaggaattgatacaggatcttttt
aaagtatggaaagatcctcaaagaggaactgtaagtggtggaatgatcagagagcttctc
atttctttcaagagggcaactggacagaaaccccagaggattatattttacagggatggt
gtcagtgaaggacagttttatcaggttctgttttatgagcttgatgccattagaaaggca
tgtgcatctttggaagccgattatcagccacccgttacctttgtggtggtccagaagcgt
catcacacaaggctgtttgctaataaccacaaggaccagcgcactgttgacagaagtgga
aatatactaccaggcaccgtggttgattcaaagatatgccatcctactgagtttgatttc
tacctgtgtagccatgcgggcattcagggaacaagtcgccctgcacattatcatgttctg
tgggatgagaacaagttcactgctgatggtttgcaaactctgacaaacaacttgtgctac
acctatgcaaggtgcacccgttccgtatcaatcgttcctcctgcatattatgcccatctc
gcggcatttcgagctcgattttacatggagccggatacttcagatagtgggtcgatggcg
agcggtgcccatacccgtggcggtggcccccttcctggtgcacgcagcactaagcctgct
gggaatgttgctgtaaggccgcttcctgatctgaaggaaaatgtcaaacgtgtcatgttc
tactgctaa

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