Oryza sativa japonica (Japanese rice) (RefSeq): 4330379
Help
Entry
4330379 CDS
T01015
Name
(RefSeq) AP-2 complex subunit mu
KO
K11826
AP-2 complex subunit mu-1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4330379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4330379
Membrane trafficking [BR:
osa04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
4330379
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adap_comp_sub
Clat_adaptor_s
Motif
Other DBs
NCBI-GeneID:
4330379
NCBI-ProteinID:
XP_015627628
UniProt:
Q6ZGX8
A3AAA5
LinkDB
All DBs
Position
2:28355603..28360590
Genome browser
AA seq
438 aa
AA seq
DB search
MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRMHIMQTKELGTCPVRQIGGCSFLY
MRISNVYIVIVVSSNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM
DFGYPQNLSPEILKLYITQEGVRSPFSSKPSDKPVPNATLQVTGAVGWRREGLMYKKNEV
FLDIVESVNLLMSSKGSVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKEAQLKSRPA
KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTIKE
LGRTRMEINVKVKSVFGAKMFALGVVVKVPVPKQTAKTSFQTTSGKAKYNASIDSLVWKI
RKFPGQTEATMSAEVELISTMGEKKSWNRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN
TVEWVRYITRAGSYEIRC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggcggcgtcggccatctacttcctcaacctccgaggggacgtcctcatcaac
cgcctctaccgcgacgatgtcgggggaaatatggttgatgcattcaggatgcacattatg
caaacaaaagaactgggtacatgccctgttcggcaaataggaggctgttcattcctttac
atgaggattagtaatgtctatattgtgatcgtggttagcagcaatgctaatgttgcttgt
gctttcaagtttgtcgtggaggcagtggctcttttcaagtcatactttggtggtgctttt
gatgaagatgctatcagaaataactttgttttaatctatgagcttcttgatgaaattatg
gacttcggttaccctcaaaacctctcacctgaaatcttaaaattgtatataactcaagaa
ggagttcggtcgccattttcctccaagccttcagataagcctgttccgaatgccactcta
caagttactggtgctgttggttggagaagagagggtcttatgtacaagaagaacgaggtt
ttcttggacattgttgaaagtgtaaatcttcttatgtcttctaaagggagtgttctacga
tgtgatgtgactgggaagattcttatgaagtgcttcctttctggaatgcctgatctgaaa
ttgggattaaatgacaagatcgggcttgaaaaagaagctcaactcaagtccaggcctgca
aagagcggaaagaccattgagcttgatgatgtcacattccaccagtgtgtcaacttgaca
agatttaactcagaaaagacagtcagctttgtgccgccagacggtgaatttgaattgatg
aaatatcgaatcactgagggtgtaaatctcccattccgggttctaccaacgattaaggaa
ttgggccgaacacgcatggagataaatgttaaagttaagagtgtttttggtgctaagatg
tttgcacttggtgttgtcgtcaaagtccctgttccaaaacaaacagcaaagactagtttc
caaaccacatctgggaaagccaaatataatgcttcaattgattccctagtgtggaagatc
aggaagtttcctggacaaactgaggcaaccatgagtgccgaagttgagctgatttctaca
atgggggaaaagaaatcatggaacaggccgccaattcagatggaattccaggttcctatg
tttactgcttctgggttacgagttcggttccttaaggtgtgggagaagagcggttacaac
accgttgagtgggttcgctacatcacaagggctggatcatatgagataaggtgttag
Oryza sativa japonica (Japanese rice) (RefSeq): 4331370
Help
Entry
4331370 CDS
T01015
Name
(RefSeq) AP-2 complex subunit alpha-2
KO
K11824
AP-2 complex subunit alpha
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4331370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4331370
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4331370
Membrane trafficking [BR:
osa04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
4331370
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
4331370
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptin_C
Alpha_adaptinC2
Cnd1
DUF1241
Motif
Other DBs
NCBI-GeneID:
4331370
NCBI-ProteinID:
XP_015631820
LinkDB
All DBs
Position
3:697870..708658
Genome browser
AA seq
1041 aa
AA seq
DB search
MALSGMRGLSVFISDIRNCHNKEQERLRVDKELGNIRTRFKNEKGLSPYEKKKYVWKMLY
IYMLGYDVDFGHMETVSLISAPKYPEKQVGYIVTSCLLNENNDFLRMVINTVRNDIIGRN
ETYQCLALTMVGNIGGKEFSESLAPDVQKLLISSSCRPVVRKKAALCLLRLYRKNPDVVN
IDGWSDRMAQLLDERDLGVLTSVMSLFVSLVSNNAEAYWNCLPKCVRILERMARNQDIPQ
EYTYYGIPSPWLQVKTMRALQYFPTIEDPGARRALFEVLQRILMGTDVVKNVNKNNASHA
VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMSRMLLVTDVQDIIKR
HQAQIITSLKDPDISIRRRALDLLYGMCDVTNAKEIVEELLQYLNTAEFAMREELSLKAA
ILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWYRVVQFVTNNEDLQPYAAAKAREYLDK
PALHETMVKVSAYLLGEYGHLLARRPGCSPKELFAIINDKLPTVSTSTVAILLSTYAKIL
MHTQPPDVGLQQQILTIFKKYESYIDVEIQQRAVEYFELSRKGAALADVLAEMPKFPERE
SALLKKAEDAEVDTAEQSAIKLRSQQQTSSAIVIADQPPVNGSVPASNHLTLVKMPSQNI
TEESNVAYEEPPVEIPKENGAPVEVESKVENIPETNIESKVEPPAAHPASQADLLADLLG
PLAIEGPPAAVEQNPVQGLETNQSPVGDLALATLEDQSNSVQPIVNVEEKFHILCSKDSG
VLYEDPHIQIGLKAEWRAHHGRLVLFLGNKNTAPLLSVQALILPPSHLKTELSSVPDTIP
PRAQVQIPLEVVNLRASRDVAVLDFSYTFGTSLVNVKLRLPVVLNKFLQPITLSPEEFFP
QWKALNVQNLKVQEVVKGVKPLPLPEIASLFMSLHLAVAPGLDNNPNNLVACTTFFSETT
RAMLCLVRIETDPQDRTQLRLTVASGDQYLTFELKEYIKEHLIDIPRVQTASPPVPVQPQ
LPPAAVPATYNDPGAMLAGLL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccgggatgcgggggctctccgtcttcatcagcgacatccgcaactgccac
aacaaggagcaggagcgcctccgcgtcgacaaggagctcggcaacatccgcacgcgcttc
aaaaacgagaagggactatcgccttatgagaagaaaaagtacgtatggaaaatgctttac
atatatatgctgggttatgatgttgactttgggcacatggaaactgtttctttgatatct
gctccgaagtatcctgagaaacaggttgggtacattgtgacatcttgcttattgaatgaa
aataatgatttcctacggatggttataaatacagtacgcaatgacataataggacggaat
gagacttatcagtgcttagcattgacaatggtaggtaatattggtgggaaagaattttcc
gagtcactggccccagatgtccagaaacttcttatttctagtagctgccgtcccgtggtc
agaaagaaggcagcactatgccttctgcggctttataggaagaaccctgatgttgtgaat
atcgatggctggtctgatcggatggcacagcttctagatgagcgggatctgggcgtactg
acatctgtcatgagcctttttgtttcactggtatctaataatgctgaagcatattggaat
tgccttccaaaatgtgtaaggatattggagaggatggcaagaaaccaagatatcccacaa
gaatacacttattatggaattccatctccatggcttcaggttaagacaatgagggctctt
cagtacttccctacaattgaagatcctggcgcaagacgagctttatttgaggttttacag
cgcattttaatgggtactgatgttgttaaaaacgtcaacaagaataatgcctcacatgct
gttctctttgaagctcttgctcttgttatgcatcttgatgctgaaaaggagatgatgtcc
cagtgcgtggctcttcttgggaagtttattgcagttcgggaaccaaatattaggtatctt
ggtctggaaaacatgtctaggatgctgttagtaacagatgtacaggatatcattaaaagg
caccaggcccagattattacctctttgaaagatccagatatcagtattagaaggcgggct
cttgatctgttatatggtatgtgtgatgttacgaatgcaaaggaaattgtcgaggagtta
ttgcagtatcttaacacagctgaatttgcaatgcgcgaagagctgtccctgaaggcagct
atccttgctgagaaattcgctccagatctttcatggtatgtcgatgttattctgcagctg
atagacaaagcaggagattttgtaagtgatgatatatggtatcgagtggtacaatttgtc
accaacaatgaagatctgcagccatatgctgcagcaaaggctagagaatacctcgacaag
cctgctttgcatgaaacaatggttaaggtgagtgcataccttcttggggagtatggccac
ctattggcccgaagacctggttgcagtcctaaggagttgtttgctataataaatgacaag
cttccaacagtatcgacgagtactgtcgctattcttctgtcgacttatgccaagatactg
atgcacacacaaccccctgatgtgggactgcagcaacaaatcctgacaatattcaagaag
tacgagagttatattgatgttgaaatacagcagagagcagtcgaatattttgaactaagc
aggaaaggtgctgctttggcagacgtgttagcagaaatgccgaaatttcctgaacgtgag
tctgctctgttgaagaaggctgaagatgctgaggttgacacagcagagcaaagtgctata
aaattacgaagtcagcaacaaacatcgagtgctattgtcatagctgatcagccacctgta
aatggatcagtaccagcatctaatcatctcactcttgtgaagatgccaagtcaaaatatc
actgaagagagcaatgttgcttacgaagaacctccagtagaaattccgaaagaaaatggt
gctcctgttgaagttgagagtaaagtcgaaaatatcccagagaccaacattgagagcaag
gttgagcctcctgcagcgcatcctgcttctcaagcagacctccttgcagatcttttgggt
cctcttgcaatagagggtcctcctgctgctgtagaacaaaaccctgttcaaggactggag
actaatcaaagtccagttggtgatttggcactagcaacccttgaagatcagtcaaactca
gttcagcctattgtaaatgttgaggagaagtttcatatattatgctcaaaagatagtggg
gtactttatgaggatcctcacattcagattggtttaaaagcagagtggcgtgctcatcat
ggtcgtctcgtacttttcctgggaaacaaaaatacggcaccacttttatcagttcaggct
ctgattttgcctcctagccatttaaaaacggaactctcatcagttcctgatactattcct
ccaagagcacaggtccaaattccacttgaggttgtgaatcttcgtgcaagtagagatgtc
gctgttcttgatttttcatatacatttggaacttcactggtgaatgtcaaactccggctc
cctgttgtattgaataaatttttgcaacctataactctttcccctgaagagtttttccct
cagtggaaagcattgaatgttcaaaatctaaaagttcaagaagtggttaaaggtgtgaaa
ccattacctcttcctgagatagctagtcttttcatgagccttcacttggcggttgctcct
ggacttgataataacccgaacaatctggttgcatgcactacattcttttctgaaacaacc
cgtgccatgctttgtctggtcagaatcgaaactgatccacaagatagaacgcaactccgg
ctcacagtggcatcaggagatcagtatttgacattcgagttgaaagagtacatcaaggaa
catttaattgatatcccaagggtacaaacagcctcacctcccgttccggtgcagccacag
ttgcctccggcggcagtacctgccacatacaatgaccctggtgcaatgctagctgggttg
ctataa
Oryza sativa japonica (Japanese rice) (RefSeq): 4351755
Help
Entry
4351755 CDS
T01015
Name
(RefSeq) AP-2 complex subunit sigma
KO
K11827
AP-2 complex subunit sigma-1
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4351755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4351755
Membrane trafficking [BR:
osa04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
4351755
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clat_adaptor_s
Motif
Other DBs
NCBI-GeneID:
4351755
NCBI-ProteinID:
XP_015618362
UniProt:
Q2QW51
Q0IPF9
LinkDB
All DBs
Position
12:5602162..5606143
Genome browser
AA seq
142 aa
AA seq
DB search
MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVEFRTHKVIYR
RYAGLFFSMCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA
GELQETSKRAIIERMGELEKLE
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgatccggttcatcctgctgcagaatcggcaggggaagacgcggctggccaagtactac
gtcccgctcgaggactcggagaagcacaaggtcgagtacgaggtgcatcggctggtggtc
aaccgggatcccaagttcaccaacttcgttgagttccggacgcataaagttatatacagg
cgatatgcaggactgtttttctcaatgtgtgtggatatcactgacaatgagttggcatac
ttggaatgcatccacttgtttgtcgagatattagatcatttcttcagcaatgtgtgtgaa
ctcgacttagtatttaatttccacaaggtttatttgatattggatgagtttattctcgct
ggagaacttcaagagacaagcaaaagggcaataatagagcgaatgggtgagcttgagaag
ctggaataa
DBGET
integrated database retrieval system
