Oryza sativa japonica (Japanese rice): 4330440
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Entry
4330440 CDS
T01015
Symbol
OsJ_08060, OsOTP51, OTP51, PLS
Name
(RefSeq) pentatricopeptide repeat-containing protein OTP51, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4330440 (OsJ_08060)
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
4330440 (OsJ_08060)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
ARM_TT21_N
Leuk-A4-hydro_C
Motif
Other DBs
NCBI-GeneID:
4330440
NCBI-ProteinID:
NP_001404043
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All DBs
Position
2:join(29407819..29408322,29408908..29410776)
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AA seq
790 aa
AA seq
DB search
MATTSPCAAPSPSLRCPLALSHPFASPPPPPALRLAGPKLLPGRLAVSPPPGIPAVASAL
ESLILDLDDDEEDEDEETEFGLFQGEAWAAADEREAVRSPELVVPELEELPEQWRRSRIA
WLCKELPAYKHSTFTRILNAQRKWITQDDATYVAVHCLRIRNNDAAFRVYSWMVRQHWFR
FNFALATRVADCLGRDGKVEKCREVFEAMVKQGRVPAESTFHILIVAYLSVPKGRCLEEA
CTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKYNLKQAEFVYHNVVTTNLDVHKDV
YAGLIWLHSYQDVIDRERIIALRKEMKQAGFDEGIDVLVSVMRAFSKEGNVAETEATWHN
ILQSGSDLPVQAYVCRMEAYARTGEPMKSLDMFKEMKDKNIPPNVASYHKIIEIMTKALE
VDIVEQLMNEFIESDMKHLMPAFLDLMYMYMDLDMHEKLELTFLKCIARCRPNRILYTIY
LESLVKVGNIEKAEEVFGEMHNNGMIGTNTKSCNIMLRGYLSAEDYQKAEKVYDMMSKKK
YDVQADSLEKLQSGLLLNKKVIKPKTVSMKLDQEQREILIGLLLGGTRMESYAQRGVHIV
HFQFQEDSNAHSVLRVHIHERFFEWLSSASRSFDDGSKIPYQFSTIPHQHFSFFVDQFFL
KGQPVLPKLIHRWLTPRVLAYWFMFGGSKLPSGDIVLKLSGGNSEGVERIVNSLHTQSLT
SKVKRKGRFFWIGFQGSNAESFWRIIEPHVLNNFASLVTQEGSSIGSDGTQDTDTDSDDD
MQMSDTERDE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacctctccctgcgccgcgccatccccatcgctacgatgccctctcgcgctc
tcccaccccttcgcctctcctcctcctcctcccgccctccgtctcgccggcccgaagctt
ctccccggccgcctcgccgtgtccccgcctcctggaatcccagcggtagcgtcagcgctg
gagtccctaatcctggatttggacgacgacgaggaggatgaggacgaggagaccgagttt
gggctgttccagggagaggcgtgggcggcggccgacgagagggaagcggtgaggtcgccg
gagctggtggtgcccgagctggaggagctgcccgagcagtggcgccgctccaggatcgcc
tggctctgcaaggagctccccgcctacaagcactccaccttcacccgcatcctcaacgcc
cagcgcaagtggatcacccaggacgacgccacctacgtcgccgtccattgcctccgcatc
cgcaacaacgacgctgccttccgggtgtatagctggatggtacggcagcactggttccgc
ttcaactttgcactagccaccagggtggcagattgccttgggagggatgggaaggttgag
aaatgccgggaggtgtttgaggcgatggtcaagcagggccgtgtgcctgcagagtctacc
ttccacatactgattgttgcttacctcagtgtacctaaagggcgttgccttgaggaggca
tgcactatctacaaccagatgatacagatgggtggttacaagcctcgccttagccttcat
aactccttgttccgtgcgcttgttagtaagacagggggaactgcaaagtacaatctcaag
caggctgagtttgtgtaccataatgtggtcaccaccaatcttgatgtgcacaaggatgtc
tacgctgggctcatctggcttcacagctaccaggatgtcattgatagagaaaggatcata
gctcttaggaaggagatgaagcaagcaggctttgatgagggtattgatgtgctggtgtca
gtgatgagggccttttccaaggaagggaatgttgcagaaacagaggccacgtggcacaat
attcttcagagtggttctgacctccctgttcaggcctatgtctgccgaatggaggcttat
gcccggactggtgagcctatgaaatctctcgatatgttcaaggaaatgaaggataaaaat
atacctcctaatgttgcatcatatcataaaataattgagataatgacaaaagctctggaa
gtagatatcgtggaacaacttatgaatgaatttattgagagtgatatgaagcatttgatg
ccagccttccttgacttgatgtacatgtacatggatctggatatgcatgaaaagttagaa
ttaacattcttaaaatgcatagccaggtgccgtccaaacagaatattgtacaccatttat
ctggaatcactagtaaaggttggaaatatcgagaaggctgaggaggtatttggtgaaatg
cacaataatgggatgataggtactaacacgaagtcgtgcaacattatgctaagaggttat
ctttctgcagaagactatcagaaagccgaaaaggtttatgatatgatgagtaaaaagaaa
tatgatgtacaggcagactctttggaaaagctccaaagtggtctccttctcaacaagaaa
gttattaaaccaaaaactgtgagcatgaagctggatcaagagcagcgtgaaattttaatt
ggtttgcttctgggaggcactcgaatggaatcttatgcacagcgaggggtccatattgtg
cactttcagttccaggaagattccaatgctcattcagttttaagggtgcacattcatgag
cgtttctttgaatggttgtcttcagcaagcagatcattcgatgatgggagcaagataccc
tatcagttttcaacaatacctcaccagcatttcagtttctttgttgaccagttctttctg
aaaggtcagcctgtgctcccaaagcttatccataggtggttaactccacgtgttctagca
tattggttcatgtttggaggctccaaactcccatcaggtgatattgttcttaagctcagt
ggtgggaatagcgagggtgttgagagaattgtgaactccctgcacacacagtcgttaaca
agtaaagtgaagaggaaggggagattcttttggataggttttcagggtagcaatgctgaa
tctttttggagaattatagagcctcatgttttgaacaattttgcgagtttagtaacacag
gaaggtagcagcataggctctgatggtacccaagataccgacactgattctgacgatgat
atgcaaatgtccgatacagaaagagacgagtga
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