| Entry |
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| Name |
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
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| KO |
| K11648 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 |
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| Organism |
osa Oryza sativa japonica (Japanese rice)
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| Pathway |
| osa03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
4330573
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
4330573
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:osa01009]
4330573
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:osa03021]
4330573
03036 Chromosome and associated proteins [BR:osa03036]
4330573
Protein phosphatases and associated proteins [BR:osa01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
4330573
Transcription machinery [BR:osa03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
4330573
SWI/SNF complex
4330573
Chromosome and associated proteins [BR:osa03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
4330573
PBAF complex
4330573
SWI/SNF complex
4330573
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:join(30563788..30563840,30563937..30564025,30564123..30564217,30564321..30564392,30564476..30564523,30564645..30564728,30565313..30565351,30565483..30565568,30565687..30565749,30565962..30566057,30566175..30566184)
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| AA seq |
244 aa
MKTVSLGAARPSSVKFRMPTRDNLVPIRVDVEVDGQRYRDAFTWNPCDPDSEIISFAKRT
AKDLKLPANFVPQMLHSIQGQLTEFRSYEGEEMQIREKIVPLKIDLRINNTVIRDQFLWD
IGNLDSDPEEFARTLCDDLNITDPEVGPAIAVSIREQLYEIASQSVSAMREAARVSKKGR
RAPEFASNSKAMNNSLDLFKYFGSKGSVVRKRKEWYLYEPVVDVITNEEVGVTDATEEIN
SRNA |
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| NT seq |
735 nt +upstreamnt +downstreamnt
atgaagacggtgagcctcggcgccgccaggccttcgtctgtcaagttccgcatgccgacg
agggataacctggtgccgatacgcgtcgacgtcgaggtggacggccagcgctacagggac
gccttcacctggaacccatgcgaccccgactcggagatcataagcttcgcgaagaggacg
gccaaggacctcaagctgccggccaacttcgtcccccagatgctccactccatccagggg
caactgaccgagttccgttcctacgagggagaggagatgcagatcagggagaagattgtg
cccctcaagattgacctccggataaacaatactgtaatcagagatcagttcttgtgggat
ataggcaacctggatagtgatcctgaggaatttgcaaggacgctatgtgacgatttgaac
attacagatcctgaagttgggcctgcaatagctgtctccatccgcgagcagctttatgag
attgctagtcaaagtgtttctgctatgagggaagcagctagagtttcaaagaaggggagg
cgagcaccagaatttgcttcaaatagtaaagccatgaacaattcactagatctattcaag
tattttggcagcaaagggagtgtcgttcggaaaaggaaggaatggtacttgtatgagcct
gttgtagatgtcataactaatgaggaagttggagtaactgatgcaacagaggagattaac
tccaggaatgcatga |
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