Oryza sativa japonica (Japanese rice): 4330613
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Entry
4330613 CDS
T01015
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4330613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4330613
Spliceosome [BR:
osa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
4330613
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
4330613
NCBI-ProteinID:
XP_015625450
LinkDB
All DBs
Position
2:complement(join(30892760..30892912,30893227..30893302,30893771..30893873,30893985..30894055,30894162..30895036,30895583..30895720,30895805..30895867,30896662..30896664))
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AA seq
493 aa
AA seq
DB search
MASLPDSFLADLDELSDNEAYPEGEDEEARNMEEDGDGGMPCCEFLNHDDLNSASELHKT
QRYNDIMQKIEDALHRGTSILPEDLEHQLIADSNALLVDIDNEITIIYNFIREKYXQKLP
LLESRVHHPIDYAHIVKKIGNEMDLTCVDLKDILPSADIMWIMMTDSIASKEPLSEENLV
KTIKACDRALTLDAAKRKVLDFLXSRMGCIAPNLSAIVGSAVASKLMGAAGGLEALAKMP
SCNLQLLGAKKKNLSGFSTAASQFRVGYLEQTEVFQSTIPSLRTHACRIISAKSTLAARI
DSIRGDPTGKAGHSLLEEICKKTEKLQELPPAKILKPLPVPDCMPKKKRGGCRLRKMKER
YAQTDMMKLANRMQFGVPEESSLGDGLGKGYGLLGQAGSGKLRLLAGQSRLAAKVAKRFK
ARSCDRSESRSGLTSTLAFTPVQGMELSNPLVHNDHSVSGTQSTYFSDVGTFSSIRGKDA
IPIQSSEIQNPGV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcttcctgattctttcttggccgacttagatgagttatcggacaatgaagcc
tatcccgaaggcgaagatgaagaggcaagaaatatggaagaagatggtgatggtggcatg
ccttgctgtgaatttcttaatcacgatgatcttaacagtgcctcagagcttcataagact
caacgttataacgacattatgcaaaaaattgaagatgctcttcacagagggacaagcata
ttgccagaagatttggaacatcaacttattgctgattccaatgctttattagtagatatc
gataatgagatcactatcatctacaatttcatacgggagaagtactagcaaaagcttcct
ctactagagtctcgcgttcaccacccaatcgattatgcccacattgtcaagaagattgga
aatgagatggatttaacttgtgttgatttgaaagatattttgccatctgcagacataatg
tggattatgatgaccgattcaatagctagcaaggagcctctttctgaagagaatttggta
aaaacaatcaaagcatgtgatagagctcttactcttgatgcagcaaagaggaaagttctt
gattttttatagagtcgaatgggatgtatcgcaccaaacctttctgcaattgttgggagt
gctgttgcttcaaaactgatgggagctgctggtggtttggaagcattggcaaaaatgccc
tcttgtaatttgcagcttctcggtgcaaagaagaaaaatctgtctggattttctactgca
gcatcccagtttcgtgttggttatcttgaacaaactgaagtatttcaaagcacaattcca
tctttaagaactcatgcatgtagaattatatctgcaaaatcaacactagcagcaaggatt
gattccataagaggggatccaactggaaaagctgggcatagcttgttagaagaaatctgt
aaaaagactgaaaagttgcaagaattaccacctgcgaagatcctaaagccacttcctgtt
ccagattgtatgcccaaaaagaagagaggaggttgtcggctccggaaaatgaaagaaaga
tatgcacagactgacatgatgaagctggcaaatcggatgcagtttggtgtgccggaggag
agctcattaggtgatggcttagggaaaggttatggcttgcttggacaagcaggaagtggg
aaactacgtctcttagctggccaaagcagacttgctgctaaggttgccaaacgattcaag
gcaaggagttgtgacaggagtgagtcaaggtcggggttaacatcaactctggcatttaca
ccagtccaaggaatggagctttcaaatccactggtgcacaatgaccattctgtcagtgga
acccaaagcacttatttttcggatgttgggacattttcaagtatcagaggaaaagatgcc
atccccattcagtcatcagaaattcagaatccaggggtgtga
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