Oryza sativa japonica (Japanese rice) (RefSeq): 4330633
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Entry
4330633 CDS
T01015
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4330633
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
4330633
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
4330633
NCBI-ProteinID:
XP_015625114
UniProt:
B9F2K2
Q6Z2J8
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All DBs
Position
2:complement(30542192..30553586)
Genome browser
AA seq
1620 aa
AA seq
DB search
MDGAHGQRQPMSPAISASAVLPQQRQMQLHHHHHHPARSSIADLFTLYLGMNSKQRVEDP
TRETSNKLQKRVTAMNRDLPPRDEQFISDFEQLHMQFPDQEQLQAVTESVLISFVLQCSS
HAPQSEFLLFATRCLCARGHLRWDSLLPSLLNVVSSVEVPMGQGVSVTTGGPATSSSSAI
AVPNAPSFHPSNPTSPLSAMNTIGSPTQSGIDQPIGANVSPIKGAEFSSPGQLGLTARGD
QSRRGAEISYLHHLSCRIILAGLESDLKPATHAVIFQHMVNWLVNWDQRPHGVDQADALQ
LQTLRLERPLHEWMHLCLDVIWILVNEDKCRVPFYELVRSNLQFLENIPDDEALVSIIME
IHRRRDMVCMHMQMLDQHLHCPTFATHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPL
HGEDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRQHPQQSSTPGAVF
SPDMIGEAVADRTIELLRLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVT
NSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQ
SILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWRQMTKASGERMIDFTSLDE
RAMGMFWVLSFTMAQPACEAVMNWFTSVGVADLIQGPNLQPNERMTMMRETYPLSMSLLS
GLSINLCLKLAFQLEETIFLGQNVPSIAIVETYVRLLLITPHSLFRPHFTTLTQRSPSIL
SKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKVKRGEHRLFRLAENLCMN
LILSLRDFFLVKKELKGPTEFTETLNRITIISLAITMKTRGIAEVEHIIHLQPLLEQIMA
TSQHTWSEKTLRYFPPLIRDFLMGRMDKRGQAIQAWQQAETTVINQCNQLLSPSAEPTYV
MTYLSHSFPQHRQYLCAGAWMLMNGHLEINSANLARVLREFSPEEVTANIYTMVDVLLHH
IQLELQRGHQIQDLLSKAITNLAFFIWTHELLPLDILLLALIDRDDDPYALRLVINLLER
PELQQRIKAFCTSRSPEHWLKNQPPKRVELQKALGNHLSGKERYPPFFDDIAARLLLVIP
LIIYRLIENDATDIADRVLAVYSTFLAFHPLRFTFVRDILAYFYGHLPSKLIVRILNVLG
VSTKTPFSESFAQYLASSNSSICPPPEYFANLLFGLVNNVIPPLSCKSKSNPSDAAGSTA
RTTYNKPYTSSAGGISNSDGQRAFYQNQDPGSYTQLVLETAAIEILSLCVPASQIVSSLV
QIIAHVQAMLIQSNSGHGMSGGLGQNSGVPTSSGGGVEPVGANRPNTTASGINASNFVSR
SGYSCQQLSVLMIQACGLLLAQLPPEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVG
YALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTVIKHLRPVNSVAMLRIAF
RILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPPVEASEIADIIDFLHHAVMY
EGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLSHLKTDPNSSVYAATHPKLVQNPS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggacggggcgcacgggcagaggcagccgatgtctccggcgatctctgcttcggcggtg
ctcccgcagcagcggcagatgcagctccaccaccaccaccaccacccggcgcggtcgtcc
atcgccgatctcttcaccctatacctcggcatgaactcgaagcagcgggtcgaggatcca
actagggagacctcgaacaagttgcagaagagagtaactgctatgaacagagatctgcct
ccccgagatgagcaattcatttcggattttgagcagttgcacatgcagttcccagaccaa
gagcagctgcaggcagttacggaatcagttctcatctcatttgtcctgcagtgtagtagc
cacgccccacaatctgagttcttgctctttgccacacgttgcctgtgtgctcgaggccac
cttcgatgggacagtctccttccttctctacttaatgtagtttcctccgtggaggtacca
atggggcaaggggtttctgtgactactggtggcccggcaacatcttcttcatcagctatt
gcagtgccaaatgccccaagctttcacccttcaaatcccacatctccattgtcagcaatg
aacactataggatctcccactcaatctggtatcgaccaacccataggtgcaaatgtctca
cccattaagggagcagaattctctagccctggacagcttggtctgacagctagaggtgac
cagtctcgcaggggagcagaaattagttatctgcatcacttatcctgtagaattattcta
gcagggctggagtctgatttgaagccagccacccatgctgtgatattccagcatatggta
aattggcttgttaattgggaccagcgaccgcatggtgtggaccaagctgatgcattgcaa
ttgcaaaccttgaggcttgaaagacctttgcatgaatggatgcacctatgcttagatgtg
atatggattctagttaatgaagataaatgtcgtgttccattctacgagcttgttcgcagc
aacttgcagtttctcgaaaatattcctgacgatgaagcactagttagtattattatggag
atccataggaggagggacatggtatgtatgcacatgcagatgttggatcaacaccttcat
tgcccaacatttgcaactcatcggttcttgtcgcaatcatacccaagcatagctggtgaa
tctgttgctaatttgcgttattctcccattacttatccaagtgtattgggagagccgcta
cacggagaggatcttgcaaactccattcctaaagggggtttagactgggaacgtgctttg
cgttgcttgaggcatgcactccgcacaactccgtcaccagactggtggaggcgtgttctt
cttgttgctccttgttatagacaacatcctcaacaatcatcaacgccaggagctgttttc
tcacctgatatgatcggtgaggcagttgctgacaggacaattgaactactgaggctcacg
aactcagagactcagtgctggcaagattggcttttatttgctgacatttttttctttctg
atgaaaagtggctgtattgattttcttgatttcgtggacaagcttgcatctcgagtaaca
aatagtgatcaacagattcttcgcagtaatcatgtcacttggttactcgcacagattatc
cgcattgagattgtgatgaacacccttagttcggacccaaggaaggttgaaactacaagg
aagataatttcgttccacaaagaagacaagagccttgatccaaataatatcagtcctcaa
agtattcttcttgatttcataagtagcagccaaactttgcggatttggtctttcaacact
tcaattagagagcatttgaacagtgatcagcttcagaaaggcaaacagatagatgagtgg
tggagacaaatgacaaaagcttctggggagaggatgatagattttacgagcttggatgag
cgggcgatgggcatgttttgggttctctccttcaccatggcacaaccagcatgtgaagca
gtcatgaactggtttacatcagtaggagtagcagatttaattcagggacccaatttgcag
ccaaatgaaagaatgacaatgatgcgtgaaacttatccactgtctatgtcattgctttct
gggttgtctatcaatctatgtttgaaacttgctttccagcttgaagagaccatatttctt
ggccagaatgttcctagcattgctatagtggaaacctatgttagactgctgcttataacc
cctcattcattgttccgcccgcattttacgacattaacacaaagatctccatctatcctg
agcaaatctggtgtgtctctgctcctacttgagatactgaattacaggctacttcctcta
tacaggtatcatgggaaaagcaaggcattgatgtatgatgttacaaagataatatcaatg
attaaagtcaaacgtggagagcatcgtctttttagattagcagaaaatttgtgcatgaat
ttgattctctcactaagagacttctttttggtgaaaaaagaattgaagggtccaactgag
tttactgaaacacttaaccgcataacgataataagccttgctatcaccatgaagacacgt
ggaattgctgaggtcgaacatataattcatcttcaaccattattagagcaaattatggca
acgagccagcatacatggtcagagaagactctaagatattttcctccccttattcgagat
tttttaatggggaggatggataagagaggccaagctatccaagcatggcagcaggctgag
acaactgttattaatcaatgtaatcagctactctcaccatctgctgagccaacctatgtt
atgacatatttaagtcacagtttccctcagcatcgtcaatatctttgtgctggtgcttgg
atgctgatgaacggacatctagagatcaacagtgcaaatcttgcccgtgttttgagagag
ttttcacccgaagaagttacagcaaatatttatacaatggttgatgttcttctgcatcat
atccaacttgagctgcaaagagggcatcaaattcaggacttactctctaaagcaattacg
aatcttgctttctttatctggacacatgagttacttccattggacattcttctgttagct
cttattgatagagatgatgatccttatgctttacgccttgtgataaatctccttgaaaga
ccggaacttcagcaaagaattaaagcattctgcacttcgcgttctccagagcattggcta
aaaaatcagcctccaaaaagagtagaacttcagaaagccctcggtaaccatctctcaggg
aaagaacgttacccccccttttttgatgacattgctgctcgtctgcttctagtcatcccg
ttgataatttataggcttattgagaacgatgccacagatatcgcagatagagtccttgca
gtttattctacctttctggccttccatcctctaaggtttacatttgtgcgtgatattctt
gcatatttctatggtcatcttccatccaagttaattgttaggatcctcaacgtgctgggt
gttagcactaagacacctttctcagaatcatttgcccagtatctagcgtcatcaaattca
tctatttgtccaccaccggaatacttcgccaaccttttgtttggccttgttaataatgtc
atacctcctttgagttgcaagtccaaatcaaacccatcggatgctgctggcagtacagca
cgcacaacttataacaagccttatacatcttccgctggaggaatcagtaactctgatggt
cagagggcattttatcaaaatcaggatcctggatcatatacacagcttgttttggaaaca
gcagccattgaaattctctcactttgtgtgccagcttctcaaatagtatcctctctagtt
caaataatagcacatgtacaagcaatgctcatacagtcaaatagtggtcatggaatgtca
ggtggtttgggccaaaactctggggtgccgacttcttcaggtgggggagttgaacctgtt
ggtgccaaccgaccaaacaccacagcaagtggaatcaatgcatctaactttgtttctaga
agtggctattcctgccaacaattgtctgttctgatgattcaagcttgtggtctgttgctg
gcacaactcccaccagaattccacacacttctatatgcagaagcagcccggatcataaaa
gattgttggtggcttgctgatagttcaaggcctgttaaagagcttgattctgctgttggg
tatgcactgttggatcctacttgggcttctcaagacaatacatctacagccataggtaac
atcgttgcccttcttcactcgtttttcagcaatcttccacatgaatggcttgaatctacc
cataccgtcatcaagcatcttcggccagtcaactcagttgccatgttaagaattgctttc
cgcatattgggtcccttgttgcctcgtctagcctttgctcgacctctgttcatgaagacc
ttggctttgctgttcaatgtgttgggggatgtatttgggaagaattctcaggcttcacct
cctgtggaggcatcggaaattgctgacataattgacttcttgcaccatgcagtcatgtat
gagggtcaaggaggtcccgttcagagcactagcaagcccaaactagagatattgacgtta
tgtgggaaagtaatggaaattctgaggccagatgtgcaacatcttctatcccacctgaag
actgatccaaactcttcagtttacgcagctactcaccccaagttagttcaaaacccatct
tag
DBGET
integrated database retrieval system
