Oryza sativa japonica (Japanese rice): 4330726
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Entry
4330726 CDS
T01015
Name
(RefSeq) RINT1-like protein MAG2 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4330726
Membrane trafficking [BR:
osa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
4330726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Usher_TcfC
DUF1122
Motif
Other DBs
NCBI-GeneID:
4330726
NCBI-ProteinID:
XP_015627457
UniProt:
B9F2Z8
Q6YUW7
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All DBs
Position
2:complement(join(31928137..31930002,31930077..31930174,31932746..31932850,31932942..31933221))
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AA seq
782 aa
AA seq
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MEAAVLPRPADITPELRRFLDSRFRSQADLAAAADVEAEIRGRYAELEASVSDLSVRLAA
AAAAYSSSCSAAGTALSNVRGCLAALNASTSEPGVTEAVEVGSEEMLFEQLSSLAKEVAR
VELVRDYAETALKLDSFVGDVEDAVSSSVTGKLKSRAESSLKTYHVPIGYLKTIEDILSS
VTKTRPQWTRLVSAVDHRVDRSLALLRPQAIVDHRALLASLGWPPSLSGTNFSSINSGKP
SEIVNPLFSMKGDLKSKYSESFLSLCSLQELQKRRKARQLEGHIVNNQLRQPLWVIEELV
NPIAAAAQRHFSKWVEKPEFVFALAYKITRDFVDSMDEILQPLVDKANLVGYSCREEWIS
GMVITLSTYLVKEIFPKHIELLQEISSADASSKQSQARVSWLNLIDLMISFDKQTQALIS
SSGLLLSVKDDDNWQRISVLSVFCDRPDWLEIWAEIERQDTHDKLRLSMENEKNWNTRFQ
GTVLEYGSDDYKSPAITGVIQKGLSLLIDRARPIPNIALRAEFIKISTSPLLSEFLGWML
QRCQEAEGLTALADDNALLKVSQSINAARYLESTLTEWCNDVFFLEMENIDGRSECIFQV
EINQLKDFRVQWTEKISTVILRDFDARSRDYLKNKRQWQEKSEGLTLSRAFVECLDYMQG
RIAKLEDGLNVLDFVTVWRTVASGVDQLLFSGIFSGSTKFSNGGVERLHGDLSILFAAFS
AWCMRPEGFFPRLSEGLKLLDIDEKQLRDGACTDNNRLREYGIRRLTAAEVEKIIKNRIY
ES
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggcggtgctcccgcgacccgcggacatcaccccggagctccgccgtttcctc
gactcccgcttccgctcgcaagcagacctcgccgcggccgccgacgtcgaggccgagatc
cgcgggcgctacgcggagctcgaggcctcggtatccgacctctccgtccgcctagcggcc
gccgccgcagcttactcctccagctgcagcgccgccggcaccgctctgagtaatgtccgc
ggctgcctcgctgccctgaatgcctccacctctgaaccaggggtcacagaagcggtggag
gttgggagcgaggagatgttgtttgagcaactttcttctctggccaaagaggtggcgaga
gtggagttggtcagggattacgccgaaacggcgctaaagcttgacagttttgtcggcgac
gtagaagatgctgtttcatcttctgtgaccggaaaacttaaatctcgtgcagaaagttca
ctgaaaacatatcatgttcctattggatatcttaaaacaatagaagatattttatcttca
gtcacaaagaccagaccacaatggactcgccttgtttctgcagtggatcacagagttgac
cgatctttggctctactaagaccacaagcaattgtcgatcatcgagctcttttggcatcc
cttggctggcctccatcactttctggaacaaatttttctagtattaattctgggaaacca
tcagagattgtgaaccccttattttcaatgaagggtgacctgaaaagcaagtattctgag
agctttctttcgctatgcagtttgcaggaattgcaaaaacgtagaaaagctcgacagcta
gaagggcacattgtcaacaatcaactacgtcaaccattatgggtaattgaagagttagta
aatccaatagctgctgccgcacaacgccatttctccaaatgggttgaaaagcctgagttt
gtttttgctcttgcttataagataactagagactttgtagattccatggatgagatatta
cagccccttgtggataaagctaaccttgtagggtatagttgcagagaagagtggatttct
ggaatggtcatcacattgtcgacatacttggtgaaagagatatttcctaagcatattgaa
cttcttcaggaaattagctcggctgatgctagcagcaaacaatctcaagctagagtctca
tggcttaatcttattgacctgatgatatctttcgacaagcaaacccaagctttgatctca
agttcaggactcctactttcggtgaaggatgatgataattggcagaggatctcggttctc
tccgtcttctgtgatcggccagactggcttgaaatatgggcagagattgagagacaggat
actcatgataagctgagattatcaatggagaatgagaaaaactggaatacaaggtttcaa
ggaacagtgcttgaatatggttcagatgactataagtctccagcaattaccggtgtaatc
caaaagggcctgtccttgctaatagatcgtgctcggcccattccaaatatagcacttaga
gcagaattcattaagatttctacttcacctttattatcagagttccttggctggatgctt
caaaggtgccaagaagcagagggattaacagctctggcagatgataatgctcttctcaag
gtatcacagtccattaatgcagctcgataccttgagtccacattgacagaatggtgcaat
gatgtattctttcttgagatggaaaatatagatggccgtagcgaatgtatcttccaagtg
gagataaatcaactgaaagattttagagtacaatggactgaaaagatttctaccgtcatt
ttaagggattttgatgcccggtcaagggattatctgaaaaataaaaggcagtggcaggag
aaatcagaagggttaacattatccagggcattcgtagaatgtttagactacatgcaagga
cggatagctaagctggaagatggtctaaatgtcctggattttgtgactgtgtggagaact
gtggcaagtggagtagaccagctgctcttttctggaattttcagtggcagcacaaagttt
agtaatggcggggtggaaagacttcatggtgatctgagtatattgtttgctgctttttct
gcgtggtgtatgaggcctgaaggcttctttccaagactgtctgagggattgaagttattg
gatattgatgagaagcagctaagagatggagcttgtacagataacaatcggctgagggag
tatggtataaggcgtttgacggctgctgaggttgagaagataataaaaaacagaatctat
gagtcgtaa
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