Oryza sativa japonica (Japanese rice): 4330793
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Entry
4330793 CDS
T01015
Name
(RefSeq) RING-H2 finger protein ATL29
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4330793
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4330793
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
4330793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
Prok-RING_1
zf-C3HC4_3
Rad50_zn_hook
HTH_31
zinc_ribbon_16
PHD
zf-RING_16
Pribosyltran
TgpA_N
zf-Nse
FANCL_C
DUF7575
SLX1_C
RINGv
PHD_NSD
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
4330793
NCBI-ProteinID:
XP_025878698
LinkDB
All DBs
Position
2:join(32463186..32464483,32465161..32465179)
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AA seq
438 aa
AA seq
DB search
MPSCRARMHAHQHQHALLAALLACALAASSSTAGAQPAGQQGYAYGDVSGQQVHVSTTMI
VLLAAVVGVFLFIAISTIYLRHCTGYDPATEGGGVGGSRSMILPANSFVSRRQRRPRGLD
SSVVRMFPTMKYAEAKALRVGKVAGAALECAVCLSEFEDDEMLRFLPKCSHAFHPDCIGQ
WLASHVTCPVCRRNLDPNKDTTEEVIIPAAAAADPNSTSSEIVVIRQEDGAHPAAVVIDV
VTEEDDEERRKEELELQAIGTQLRAMRSRSGLRPKTSAAKLPRSHSTGHSLAVRLDGDLE
RYTLRLPEHVHREMVAAGEQSVRRGRRLGEGVGMGARCSPRFSRSGRWSSFLSNSLSGKL
SFLSPSSRRTPDSTQVEVSSSSSSSVTKVKGKRVAAVDVADDGSAHGTAQYPGCTVASSA
AAAAVDVEKAATRRRMHK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgccaagttgccgagctaggatgcacgcgcaccagcaccagcacgcgctgctcgcggcg
ctcctcgcgtgcgcgctcgcggcgtcgtcgtcgacggccggagcgcagccggcggggcag
caggggtatgcctacggcgacgtgtccgggcagcaggtgcacgtcagcacgacgatgatc
gtgctgctggccgccgtcgtcggggttttcctgttcatcgcgatctccaccatctacctc
cgccactgcaccggttacgaccccgcgacggagggcggcggcgtcggcgggagccgttcc
atgatcctccctgccaacagcttcgtctcgaggcggcagcggcggccgcgcgggctcgac
tcgtcggtggtccggatgttccccaccatgaagtacgccgaggcgaaggcgctgcgggtg
gggaaggtcgccggcgccgcgctggagtgcgcggtgtgcctcagcgagttcgaggacgac
gagatgctcaggttcctgcccaagtgcagccacgccttccacccggactgcatcggccag
tggctcgccagccacgtgacctgccccgtctgccgccgcaatctcgaccctaacaaggac
accaccgaagaggtgatcatcccggccgccgccgccgccgatccgaacagcacctccagt
gaaatagttgtgatacggcaagaagacggggcgcacccagcagccgtggtgatcgacgtg
gtcaccgaggaggacgacgaggagcggaggaaggaggagctagagcttcaggcgataggc
acccagctccgcgcgatgcggtcacggtcggggctgcggccaaagacgtcggcggcgaag
cttccccggtcgcactccactggccactccctcgccgtccggctcgacggcgacctagag
cggtacacgctgcggctgccggagcacgtacacagggagatggtcgcggcgggggagcag
agcgtgcgccgcgggaggagactcggggaaggggtcggcatgggcgctcggtgcagcccc
cggttttcgcggtcgggcagatggtcatcttttctctcaaattctttgtcaggaaagctg
tctttcctctccccgtcgtcgaggagaacgccggatagcacccaggtggaagtgtcatca
tcctcgtcgtcgtcggtgacgaaggtgaaagggaagcgcgtggccgccgtcgatgttgcc
gacgacggttctgctcatgggactgcacagtaccctggttgcactgtggccagctcggcg
gcggcggcggctgtggacgtggagaaggcagctaccaggagacgaatgcataaatga
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