Oryza sativa japonica (Japanese rice): 4330796
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Entry
4330796 CDS
T01015
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4330796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4330796
Spliceosome [BR:
osa03041
]
Complex B
Other components
Prp19-related factors
4330796
Complex C
4330796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
PRCH
Motif
Other DBs
NCBI-GeneID:
4330796
NCBI-ProteinID:
XP_015626352
UniProt:
Q6K8D9
LinkDB
All DBs
Position
2:complement(32491073..32492896)
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AA seq
607 aa
AA seq
DB search
MASLKELLPTPKAAASTFYDHSSDPWFKERYGGESAQSDAAAAAAKPSGPAKPVPPYGKR
GGFVPRRPEDFGDGGAFPEIHVAQYPLGMGRRDEKGGSKILALTVDAKGSVAFDAVVKQG
ENASKIVYSKHSDLVPKIATADSEATADDEEYQKQIEETTERTKAALEKVVNVRLSAAQP
KNVPTHDSESKFIKYKPSQQSAAFNSGAKERIIRMSEMAQDPLEPPKFKHKRVPRASGSP
PVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFA
KLSEALYVAEQKAREAVQMRSKVQRELQLKEKERKEQELRALAQKARMERTGAPPAPTGV
PAGGGRGAVDDREEDMDLEQPREQRRESREEREARIERDRIREERRRERERERRLEARDA
AMGKKSKLTRDRDRDVSEKIALGMASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQYNI
YSKGLFTAQPTLSTLYRPKKDGDSDVYGDADEQLEKVMKTDRFKPDKGFSGASERSGKRD
RPVEFDKQEENDPFGLDQFLTEVKKGKKAVEKIGSGGAMRASGGSSMRDDYEGGGSGRSR
INFERGR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctcaaggagctcctcccgacgcccaaggcggcggcgtcgacgttctacgac
cacagcagcgacccgtggttcaaggagcggtatggcggggagtcggcgcaatccgacgcg
gcggcggcggcggcgaagccttcgggccccgccaagcccgtgccgccgtacgggaagcgt
ggcgggttcgtgccgcggcggccggaggacttcggggacggcggcgccttcccggagatc
cacgtcgcgcagtacccgctcggcatgggccggcgcgacgagaagggcggctcgaagatc
ctcgcgctcaccgtcgacgccaagggcagcgtcgccttcgacgccgtcgtgaagcagggt
gagaacgcctctaagatcgtttactcaaagcacagcgacctcgtgcccaagattgccacg
gctgattccgaggcaaccgcggacgacgaggagtaccagaaacagatcgaagaaaccact
gaacgaactaaagctgccttggagaaggttgtcaatgttcggctctccgccgcacagccc
aagaatgtgccgacgcatgattcagagtcaaagtttatcaagtataagccatcgcagcaa
tcggcagccttcaattcaggtgccaaggagaggattattaggatgtcagagatggctcag
gatcctcttgagccaccgaaattcaagcataagcgagtgccccgcgcttctggatcaccg
cctgtcccagtgatgcactcgccaccacggccagtgacagtgaaggaccagcaagattgg
aagattccaccatgcatttcaaattggaaaaatccaaagggttacaccataccactcgac
aagaggttggcagctgatggaagggggctgcaggaggttcaaattaatgataactttgca
aagctctctgaagcactgtatgtggcggagcagaaggccagggaggcagtacagatgcga
tccaaggtgcagagggagctgcagctgaaggagaaggagaggaaggagcaagagctaagg
gcacttgcacagaaggcgcgcatggagaggactggtgccccacctgcacctacaggggtt
cctgctggtggtggtagaggtgctgttgatgacagggaggaagatatggatttggagcag
cctcgtgagcaacgaagggagagtagagaagaaagggaagcaaggattgagcgtgacagg
attcgtgaggagaggagacgtgagagggagagagagaggaggctggaggccagggatgct
gcaatgggcaagaagagtaagctcactagagacagggatcgtgatgtcagtgagaagatt
gccctgggcatggcaagcactggcggtgctaaaggtggggaagtcatgtatgaccagagg
ttgttcaaccaggataaaggaatggactctgggtttgctacagatgatcagtataacatc
tactccaagggtctcttcacagcgcagccaacgctatccacactttacaggcctaagaag
gacggtgattctgatgtgtatggcgatgcagatgaacaactggagaaggttatgaagaca
gataggttcaaaccagacaaaggattttctggtgcttcagagaggtctggaaagagagac
agacctgtggagtttgataaacaggaggagaatgatcccttcggtcttgatcagttcttg
actgaagtgaagaaggggaagaaagctgttgagaagattggaagcggaggagccatgagg
gcaagtggtggatcctcaatgagagatgattacgagggtggaggatctgggaggtcccgc
attaactttgaaagaggtcgttga
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