Oryza sativa japonica (Japanese rice): 4330861
Help
Entry
4330861 CDS
T01015
Name
(RefSeq) proteasome subunit beta type-6
KO
K02738
20S proteasome subunit beta 1 [EC:
3.4.25.1
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
4330861
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
osa01002
]
4330861
09182 Protein families: genetic information processing
03051 Proteasome [BR:
osa03051
]
4330861
Enzymes [BR:
osa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
4330861
Peptidases and inhibitors [BR:
osa01002
]
Threonine peptidases
Family T1: proteasome family
4330861
Proteasome [BR:
osa03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
4330861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Motif
Other DBs
NCBI-GeneID:
4330861
NCBI-ProteinID:
XP_015625800
UniProt:
Q9LST9
A3ABR8
LinkDB
All DBs
Position
2:complement(join(32960571..32960702,32961253..32961327,32961543..32961616,32962016..32962127,32962312..32962384,32962510..32962565,32962882..32962958,32963635..32963776))
Genome browser
AA seq
246 aa
AA seq
DB search
MDASLMGAPSAAAGDNPTSGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKIT
QLTDNVYICRSGSAADTQVISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQ
AGMIVGGWDKYEGGQIFSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKF
VVKVVSLAIARDGASGGVVRTVTINADGVSRKFHPGDKLQLWHEELEPQNSLLDILAAGN
PDPMVQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctctctcatgggcgccccctccgccgcagcgggagacaatcccacctccggg
gagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcctcgcc
gccgattccagaaccagcaccggaatgtatgtggcaaaccgtgcgtcggacaagattact
cagctaactgacaatgtgtacatctgccgctctggatctgctgctgatacacaagtaatt
tccgattatgtacgctattttctccaccaacacacaattcagcttgggcagccagctacc
gtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgttgcaa
gctggcatgattgttggtggatgggataaatatgagggaggccaaattttctcagtcccc
cttggtggaacaattctgaggcaaccatttgcaatcggaggttcaggctctagttacctc
tatggattgcttgaccacgaatggaaggagggcatgtcccaggaagaagctgagaagttt
gtggttaaggtagtttcccttgctatagcccgtgatggtgctagtggaggggttgttcgt
accgtcactataaacgcagatggtgtttcgaggaaatttcaccctggagacaaactacaa
ctgtggcatgaagagctggagccccagaactcgttgctggacatacttgcagctgggaac
cctgatccgatggtccaatga
Oryza sativa japonica (Japanese rice): 4340065
Help
Entry
4340065 CDS
T01015
Name
(RefSeq) proteasome subunit beta type-6
KO
K02738
20S proteasome subunit beta 1 [EC:
3.4.25.1
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
4340065
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
osa01002
]
4340065
09182 Protein families: genetic information processing
03051 Proteasome [BR:
osa03051
]
4340065
Enzymes [BR:
osa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
4340065
Peptidases and inhibitors [BR:
osa01002
]
Threonine peptidases
Family T1: proteasome family
4340065
Proteasome [BR:
osa03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
4340065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Motif
Other DBs
NCBI-GeneID:
4340065
NCBI-ProteinID:
XP_015644439
UniProt:
Q5VPF1
A0A0P0WSS1
LinkDB
All DBs
Position
6:complement(join(2248844..2248975,2249462..2249536,2249751..2249824,2250209..2250320,2250453..2250525,2250708..2250763,2251096..2251172,2251801..2251942))
Genome browser
AA seq
246 aa
AA seq
DB search
MDASLMGSPSPAAGDAPTSGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKIT
QLTDNVYVCRSGSAADTQVISEYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQ
AGMIVGGWDKYEGGQIFSVPLGGTILRQPFAIGGSGSSYLYGLLDHEWKEGMSQEEAEKF
VVKVVSLAIARDGASGGVVRTVTINADGVSRKFHPGDKLPLWHEEMEPQNSLLDILAAGN
PDPMVQ
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctctctcatgggctccccctctcccgccgcgggcgacgcccccacctccggg
gagcaccggatggggaccaccatcgtcggcgtctgctacgacggcggcgtcgtcctcgcc
gccgactcccggaccagcaccggaatgtatgtggcgaaccgtgcatctgacaaaattact
caactgactgacaatgtgtacgtctgccgctctggatctgctgccgacacacaagtcatt
tcggaatatgtacgctattttctccaccaacacacaattcagcttgggcaaccagctact
gtgaaagttgcagccaacttaattaggttgttggcttatcagaacaagaacatgttgcaa
gctggcatgattgttggtggatgggataaatatgagggtggccaaattttctcagtcccc
cttggtggaacaattctgaggcaaccatttgcaattggaggttctggttccagttacctg
tatggactgcttgaccatgaatggaaggagggcatgtcccaggaagaagctgagaagttt
gtggtgaaggtggtttcccttgctatagcccgtgatggtgctagtggaggggttgttcgt
acagtcaccataaatgccgatggtgtttcgaggaaatttcaccctggtgacaaactacca
ctctggcatgaagagatggagccccagaactcgttgctcgacatacttgctgctgggaac
cctgatccgatggtccagtga
DBGET
integrated database retrieval system