Oryza sativa japonica (Japanese rice): 4330890
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Entry
4330890 CDS
T01015
Name
(RefSeq) DNA-3-methyladenine glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4330890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
4330890
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
4330890
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
4330890
Prokaryotic type
4330890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
4330890
NCBI-ProteinID:
XP_015624253
UniProt:
Q0DX49
A0A0P0VQ44
LinkDB
All DBs
Position
2:complement(join(33190989..33191152,33191233..33191290,33191381..33191451,33192113..33192236,33192344..33192415,33192508..33192879))
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AA seq
286 aa
AA seq
DB search
MKSLPSICTVHPHAHTPTPPPPPVAGGSRPSPMTTTTTSGAPTPPRFKRSPHRKKRQPRT
RRVAAGETIAAGKPPHPACTAVSLQSPFGPALPRDFFEVDALDLAPRLLGKLLRRDEVVL
RITEVEAYRPNDSACHGRFGITARTAPVFGSGGHAYVYLCYGLHMMLNVVADKEGVGAAV
LIRSCAPVSGLATIQQRRGQQTDKPLLLTGPGKVGQALGLSTDWSNHPLYTPGGLEVLDG
PEPENILVGPRVGIEYASPEHVAAPWRFAVAGTPWISAPKNTLRPR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcccttccttccatctgcaccgtccatccccacgcacacacccccacgccaccg
ccgccgccggtcgccggagggagccggccatctccgatgaccaccaccaccacctccggg
gcgcccacgcccccacgcttcaagcgatccccccacaggaagaagcggcagccccgtacc
cgccgcgtcgccgccggagagaccatcgccgcggggaaaccaccgcacccggcgtgtacg
gcggtgtcgttgcagtcgccgtttgggcccgcattgccgcgcgatttcttcgaggtggac
gcgcttgacctcgccccacgcctcctcggcaagctgctgcgccgcgacgaagtcgtcctc
cgcatcaccgaggtggaggcttacaggccaaatgactccgcgtgccacggccggttcggc
atcacggcgaggactgctcctgtgtttggatcaggagggcatgcgtatgtttacctgtgc
tatggactgcacatgatgctcaatgtcgtcgctgacaaggagggagttggagctgctgtt
ctgattcggtcatgtgctcccgttagtgggctggcaactattcagcagcgtcgaggccag
cagactgataagccacttctactcactggaccaggaaaggttggtcaagctctggggctt
tccactgactggtccaaccatcctctgtacacacctggtgggttggaggtactagacggg
ccagaaccggagaacattttggttggcccccgtgtaggcatcgaatacgcatcgccggag
catgttgctgcaccatggaggttcgccgtcgcagggacgccatggattagtgcccccaag
aacactctcagaccaaggtga
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