KEGG   Oryza sativa japonica (Japanese rice): 4330895
Entry
4330895           CDS       T01015                                 
Symbol
OsRFC3, RFC3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03030  DNA replication
osa03410  Base excision repair
osa03420  Nucleotide excision repair
osa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    4330895 (OsRFC3)
   03410 Base excision repair
    4330895 (OsRFC3)
   03420 Nucleotide excision repair
    4330895 (OsRFC3)
   03430 Mismatch repair
    4330895 (OsRFC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osa03032]
    4330895 (OsRFC3)
   03036 Chromosome and associated proteins [BR:osa03036]
    4330895 (OsRFC3)
   03400 DNA repair and recombination proteins [BR:osa03400]
    4330895 (OsRFC3)
DNA replication proteins [BR:osa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    4330895 (OsRFC3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    4330895 (OsRFC3)
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    4330895 (OsRFC3)
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     4330895 (OsRFC3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    4330895 (OsRFC3)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_16 AAA_assoc_2 AAA_11 AAA_22 DNAX_ATPase_lid AAA_5 ATPase_2 AAA_30 DUF815 AAA_7 AAA_14 RuvB_N AAA_24 bpMoxR AAA_19 ResIII ABC_tran nSTAND3 AAA_3 TniB MCM AAA_28 AAA_2 TIP49 AAA_18 SLFN-g3_helicase Mg_chelatase
Other DBs
NCBI-GeneID: 4330895
NCBI-ProteinID: NP_001403878
LinkDB
Position
2:complement(join(33219017..33219116,33219744..33219812,33219908..33219971,33220088..33220217,33220603..33220684,33220873..33221032,33221125..33221204,33221604..33221820,33222575..33222758))
AA seq 361 aa
MAGATAATPMDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVD
TIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQ
QIQDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNK
IIPALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNIL
QSTHMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDI
IREVTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA
H
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcgggagccaccgccgccactccgatggacatcgacgccgccgcgccgccgccgggg
gcggccgccaagggcaaggcgcctctctcctccactcccggcggtagggccgcgccctgg
gtcgagaagtaccgcccccaatccctcggcgatgtcgccgcccaccgcgacatcgtcgac
accattgataggcttacaaatgagaacaggcttccacatttgttgctttatgggcctccg
ggcactgggaaaacatcgacaatactggccgttgcaaggaagttgtatgggtcacagtat
ggcaacatgattcttgaactcaatgcatcagatgagcgtggtattgatgttgtaaggcag
caaatccaagacttcgcaagtgcccgcagtctctctttcggagcaaagcaatctgttaag
atggttctattggatgaagcagatgccatgaccaaggatgcacagtttgcattgcgaaga
gtcattgagaagcatacaaggagcacaaggtttgcgctgatatgcaaccatgtgaacaaa
atcattccagcactgcaatcaaggtgcaccaggtttagatttgcaccccttgatggcact
catgttagggaacgtcttaaacatataatacaatccgaggggcttgatgtagatgacggt
ggtttgacagcccttgtgcggttaagtaatggtgatatgaggaaggctttgaacatattg
cagtcaacacacatggcatctaagcaaataacagaggaagctgtgtacctttgcacagga
aaccccatgccgaaagacattgaacagatagcatactggttgctgaatgaatcattttca
accagcttcaaatgtatatctgatatgaagatgagaaaaggactggccttggttgatatc
atacgggaggtcactatgtttgtgttcaaaatacagatgccatctgatgtacgcataaag
ctgattaatgatctggctgatatcgagtaccggctaagctttgcttgcaatgacaagtta
cagctgggggcgctgatatcaactttcacgggtgctcgcacggctatggttgctgctgcc
cactaa

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