Oryza sativa japonica (Japanese rice): 4331000
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Entry
4331000 CDS
T01015
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
osa01002
]
4331000
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4331000
Enzymes [BR:
osa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
4331000
Peptidases and inhibitors [BR:
osa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
4331000
Ubiquitin system [BR:
osa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
4331000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
4331000
NCBI-ProteinID:
NP_001403919
LinkDB
All DBs
Position
2:join(34293589..34293840,34294231..34294345,34294762..34294872,34294980..34295152,34295251..34295577,34295680..34295805,34296428..34297738,34297834..34297995,34298162..34298885,34298971..34299064,34299437..34299599)
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AA seq
1185 aa
AA seq
DB search
MMGEAEEGLMHRRIEFHAARRPPRAVEGAGGRFWVEILSPDADKAAVVAAARSEGLVRGL
EKGEGSGGGIDPELRVARMYLRRIGAGLQNFGNTCYLNSVLQCLTYTEPFVAYLQSGEHM
SSCRTIGFCALCALQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSL
LESMHKCCLPSGVPSGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEI
ANAATLVKALQHFTAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPF
NPRHKIDKKVQFQPTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGI
WHNLDDNKVYQVREADVLRQKAYMLFYVRDRTRSSVMYSDNCTVNLSVNKMISEKITCMN
GSIKKDTVETKTLRVPSLVKEDVNLKKQNSENGQSSNISNAPQDQCSKSHSNTEVLEAAA
SPNNDPASTQKASCIRPDTAAVNLPMKTEQTAPDNRREITSPAQADVSVLHNASFNQKLY
EKQLQEHQLETDDALTDSRKDAPAALCTYGVGDGLLGRNGQSSEPHIGPCPAALPIHNGG
EGLLGANGQASEAHSGPCSSAFPIHNGGEGLLGASGQSSEPHTGPCPAALPIHDGGQGLL
GPNGQASEPHTDSCPAAFPIHSGGEGLLGANGQASELHTDPCPAAFPIHSGGEGLLGANG
QASEPHTDPCPAAFPIHSAGEGLLGANGQDSEHRTGPIPAAFPVWNGTGVILEKYGQVSG
PADPFCKPTPTISDTVSIAQIIPTEHAAVSNGTVSSSDDLTGNTEANESSEFVKNYGEQV
MVRDLSAETSGDRANADEQTSMQNNTLEVGKDVAKDTDNVANAEEQVLNHPLAEQVKSEK
QIYPGISTTLICSEDTTQLIDKDTGSGKLNKKMNCKSKRQVKYPAVRMFFGPKQLLLASV
KLHKKRKHKRSKKHHALSVHIESIITDQQTSTSETVFSKIISHKSRGQKRSCASASSEDG
TQLFNKKQHIEGTTNSVPMDNNDTKLASADSNDAKLASAELPSSCTNSLVNQTDSRNNVN
ANERGPWHFNLLTRGLREITVPRWDDTEIKNTKETEILHPRTRSIGYVLDEWDEEYDRGK
RKKIRKPKHGFSGPNPFQETANIRSRQRMRLQSDQTKSGNQPLRI
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgatgggggaggcggaggaggggctgatgcacaggaggattgagttccacgcggcgagg
aggccgccgcgtgcggtggagggggcgggagggaggttttgggtggagatcctgagcccg
gatgccgataaggcggcggtggtggcggcggcgaggagcgaggggctggtcagggggttg
gagaagggggagggtagcgggggtgggatcgacccggagcttcgcgtcgcgaggatgtac
ttgcggagaattggagctggcttgcaaaattttggcaatacctgctacctcaactcggtt
ctgcaatgcttgacgtataccgagccgttcgtggcctacttgcagagtggggagcacatg
tcctcatgtcggactatcggattctgtgctttatgtgctcttcaaagacatgtaaattct
gctctacagtcaactgggaagatattgagacctgtgcacattgtcagaaatttaagatgc
atttctcgtagtttccgcatctcaaggcaggaagacgcacatgagctaatggttagcttg
cttgagtccatgcacaaatgttgtttaccttctggtgtaccaagtgggtcgccaagtgct
tatgagaagagcctagttcacagaatatttggtggtctcttaagaagtcaggtgagatgc
acaacttgctcacactgttccaacaaatttgatcctttcctggatctcagccttgaaatt
gccaatgctgctactctggtaaaagcacttcaacactttactgcggaagagctactggat
ggtggggaaaagcagtacaactgcgagcactgcaggcagaaagtagtagccaagaagagg
tttatgattgagaaggctccctctgtgttgacaattcatctaaagcgctttagtcctttc
aaccctcgtcacaagatcgacaaaaaagtgcagtttcaaccaactttaaatttaaagcca
tatgtcagcaatcctgagggtatggagttcaaatacagcctttatggtgttttggttcat
gctggttggaatacacagtcaggtcactattattgctttgttcggacttctagtggcata
tggcacaatcttgatgataacaaggtttaccaagttcgtgaggcagatgtgctgaggcag
aaagcatacatgctattttatgtgcgcgacagaacaaggagctcagtgatgtacagtgat
aattgtactgttaatttatcagtaaataaaatgatctccgagaagatcacatgtatgaat
ggttcaattaaaaaagatacagtggaaacgaaaacactgagagttccctcacttgtcaaa
gaagatgtgaacttgaagaaacagaactcagaaaatggtcaatctagcaatattagcaat
gctccacaggaccagtgttcaaaaagtcatagcaacactgaagtgcttgaagctgcagca
tccccaaacaatgacccagcttcaacacagaaagcttcttgcatacgtccagatacagct
gctgttaacttgcccatgaaaacagagcaaacagctccagacaatcgaagggaaataaca
tctccagcacaagctgatgtttctgttcttcacaatgcaagtttcaatcagaagttgtat
gagaagcagctacaggagcatcaactagaaactgatgatgcacttactgattccaggaaa
gatgcccctgctgccttgtgcacatatggtgttggggatggtttgttggggagaaatggc
cagtcttctgaacctcacataggtccatgccctgctgctcttcctatacacaatggtggt
gaaggattgctgggggcaaatggccaggcatctgaagctcactcaggtccttgctcttct
gcctttcctatacataatggtggcgaaggattgttgggggcaagtggccagtcttctgaa
cctcacacaggtccatgccctgctgctcttcctatacacgatggtggtcaaggattattg
gggccaaatggccaggcttctgaacctcacacagattcttgccctgctgcctttcctata
cacagtggcggtgaaggactgttgggggcaaatggtcaggcttctgaacttcacacagat
ccttgccctgctgcctttcctatacacagtggcggtgaaggattgttgggggcaaatggt
caggcttctgaacctcacacagatccttgccctgctgcctttcctatacacagtgccggt
gaaggattgttgggggcaaatggccaggattctgaacatcgaacaggtccaatccctgct
gcctttcctgtatggaatggcactggtgtaatattggagaaatatggtcaggtttctggg
ccagcagatccattttgcaagccaactcctaccataagtgatacagtgtctattgcacaa
atcatcccaactgagcatgctgctgtttctaatggaacagtatctagtagtgatgattta
actggcaatactgaagctaacgagtcatcagagtttgtaaagaattacggcgaacaagtt
atggtgagggatctttctgcagagacctctggtgatagagcaaatgcagatgagcagact
tcaatgcagaataacacactggaagttggtaaggatgttgcaaaggacactgataatgtg
gcaaatgccgaggagcaggtattgaaccaccccttggccgagcaggtaaaatctgagaag
caaatatatcctggaatttctacaacattgatttgctctgaagacacaacacagttgata
gataaggatacaggcagtggcaaattaaataaaaagatgaattgcaagtcaaagaggcaa
gtgaagtatcctgctgttcgcatgttttttgggcccaaacaactgttactggcatcagta
aaactgcacaagaaaaggaaacacaagagatccaaaaaacaccatgcactttctgtgcac
attgaaagcatcatcactgatcagcagacatcaacatcagaaactgttttctcaaagatc
atatcacataaatcccgtggacagaaacgttcttgtgccagtgcaagttctgaggatggc
actcagctgttcaacaagaaacagcatatcgaaggaaccaccaacagtgttcccatggac
aacaacgatacaaaacttgctagcgctgacagcaacgatgcaaaacttgctagcgccgag
ctaccaagctcatgtacaaactctctggtgaaccagactgattcaagaaacaatgtaaat
gcaaatgagagaggcccctggcattttaatctcctcacaaggggtttaagagaaattact
gtgccacgttgggatgacactgagattaaaaatacgaaggaaacagagatactacatcca
aggactagaagcatcggctatgtgctagatgaatgggacgaggagtatgatcgcggcaag
agaaagaagatcaggaaaccaaagcatggcttcagtgggccgaaccctttccaggagacg
gccaacatcagatcacggcagaggatgagactacagtctgaccagaccaaatctgggaac
cagcctctcaggatataa
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