KEGG   Oryza sativa japonica (Japanese rice): 4331010
Entry
4331010           CDS       T01015                                 
Name
(RefSeq) serine/threonine-protein kinase VPS15
  KO
K08333  phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:osa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    4331010
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:osa01001]
    4331010
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:osa04131]
    4331010
Enzymes [BR:osa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     4331010
Protein kinases [BR:osa01001]
 Serine/threonine kinases: Other
  VPS15 family
   4331010
Membrane trafficking [BR:osa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    4331010
 Autophagy
  Autophagosome formation proteins
   PI3K complex
    4331010
SSDB
Motif
Pfam: VPS15-like_hel Pkinase WD40 WD40_Prp19 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I HEAT Beta-prop_TEP1_C PK_Tyr_Ser-Thr WDR90_beta-prop_4th PPP2R1A-like_HEAT Beta-prop_EML_2 Beta-prop_TEP1_2nd Tti2 Beta-prop_WDR90_POC16_2nd NBCH_WD40 HEAT_2 APH Beta-prop_CAF1B_HIR1 DUF7691 Kinase-like Cohesin_HEAT Beta-prop_RSE1_2nd Beta-prop_HPS5 Beta-prop_Vps41 HEAT_EZ TCAD9
Other DBs
NCBI-GeneID: 4331010
NCBI-ProteinID: XP_015626154
UniProt: B9F414
LinkDB
Position
2:complement(join(34382134..34382313,34382502..34382601,34382701..34382927,34383127..34386000,34386083..34386259,34386519..34386624,34387343..34387422,34388273..34388433,34388508..34388553,34388745..34388867,34389346..34389420,34389536..34389736))
AA seq 1449 aa
MGNKIAKTTQASATEYYLHDLPSTYNLVLVEVVSRGRFLKSVRCKHDEGLLLVKVYFKRA
GEPLDLKEHERRLERIRNAFEGLEGSHVWPFQVWLQTDKAAYLLRQYFYSNLHDRLSTRP
FLSKIEKKWLAFQLIHAVEQSHSKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPDD
DPSDFSFFFDTGGRRRCYLAPERFYEHGAETQVAADAPLQRSMDIFSLGCVLAELFLEGQ
PLFELSQLLAYRRGQYDPIHTLEKIQDTGIRDMVLHMIQLDPKERLSCKNYLQKYESVVF
PVYFSKFLHKFFSDIVPLHSDARVEKTQEYFEKMHDIMISGSTLEKIQGSATVPVHNELS
GKMGIGGQTVNSPKEYAKSVPVVKINSPAQHKHIVGDLNFLLKELEKDDRTSTKITQDRD
RSVTPNVSHANGIQSLQQVCQAGRTESGLMGQNNCVSHLQKISKSNLLALVSSYDAQSDT
YNFDIFQQTEYKVSCEGMVLLASLLCSCIRSVKKPELRRASLILLKICSTYIDDDSRLQL
VIPYVIAMLSDPAAIVRCAALETLSDVLCLIQDFPISDAKIFPEYILPMLSLLPDDTEES
VRVCYASNIYKLALTAYRFLLRSRSIEDARPLDESMVAPRSQSVESPVKRQQDSINGQLA
RLRKSIYEIVQELVMGQKQTPNVRRALLQDIGYLCYFFGHRQTNDFLLPILPAFLNDRDE
QLRAVYFGQIVVVCYFIGSRSVEEYLLPYLEQALSDEMEVVLVKVLDCLTMMCKSGYLRK
RAIVGLFGKALPLLCHPVQWVKRSAVRFVVACSESIGPVDTFVYLFPHLKHFLHREPPSL
SSETALLSCIKPPVSKLVLYQALEDVHDAGDILLKGDGKKELTVHGGRYPAMVQSGSSIM
IEDDSRLRGPKMSNDVSLNIKDFSSASSAYISSAVHGSSSFYDGVPKGIPLYSMQGTALH
ANLGSDRHGSLSSSVPGIRTRENHFSNMHRDGSISDSMNSSSSIPGDIISNSDNSGSFTR
PALSLETSWKPRGVLVAHLQEHRLSVNDIAVSTDNTFFVTASDDSSVKIWDTRKLEKDIA
FRSRLTYSLGSSRALCTTMLHGTPQVIVGASDGTLHLFSVDCARGVGSVIERYSGIVDVK
RKDLKEGAILSVVNCSTESFSPTILFSTEHCGIHKWDTRTNAESWSFRSSPEEGYVSALV
VGQCGNWFISGSSRGVLTLWDNRFLLPVNSWKYLPATPIEKLCLFIPPPNSISSSGRPVV
FVAAGCNEVTLWDAENGSRHQIFRTASTENEAVVPKAPSIHPNTRDETRPANYNYRIEEL
CDPPPRLPGIRSLLPLPGGDLLTGGTDLKIRYWDQARPEQSFCIAGPSVKGAGNDETYDI
RSSSCVQVVQEICRQPTTASRLTHKTQLAMAAADSAGCHRDAILALASVNLSSHRLISGS
RDGAVKVWK
NT seq 4350 nt   +upstreamnt  +downstreamnt
atggggaacaagatcgccaagacgacgcaggcgtcggcgacggagtactacctccacgac
ctcccgtccacgtacaacctcgtgctcgtcgaggtcgtcagccgcggccgcttcctcaag
tccgtccgctgcaagcacgacgaggggctgctcctcgtcaaggtctacttcaagcgcgcc
ggcgagcccctcgacctcaaggagcatgagcggaggctggagcggattaggaacgccttc
gaggggttggagggatcccacgtctggcccttccaggtttggttgcaaacggataaggca
gcgtatctccttaggcagtatttctacagcaacctgcatgatcgactaagcacacggcct
ttcctcagtaaaattgagaagaaatggcttgcttttcagttaatccatgctgtggagcag
agccatagtaaggggatttgtcatggtgacataaaatgtgagaatgttcttgttacctcc
tggaattggctatatcttgcggactttgcatctttcaaaccaacttacatcccggatgat
gatccatctgatttttcgttcttctttgatactggtggaaggcgaagatgctacctagca
cctgagagattctatgagcatggtgcggaaacccaagtcgcagcagatgcacctttgcaa
cgatctatggatatattctctcttgggtgtgttcttgctgaacttttcctagaaggtcag
ccactttttgagctttcacaacttctagcttatcggcgtggtcagtacgaccctattcat
acccttgaaaagatacaagatactggtatccgtgacatggtacttcacatgattcagtta
gacccgaaagaaaggctatcatgcaaaaactacttgcaaaaatatgaatctgttgtattc
ccggtttatttttcgaaatttctccacaaatttttctcagatattgttccgcttcactca
gatgctagggtcgagaagactcaagaatattttgaaaagatgcatgatataatgataagt
ggctcaacactcgagaaaattcaaggatctgctactgtgcctgtgcataatgaactgtct
gggaaaatgggcatcggagggcaaactgtaaattcaccaaaagaatatgccaaaagtgta
cctgtagttaagataaacagtcctgcacagcataagcatattgttggagatctcaatttc
ctcctcaaggaactggagaaggacgaccgtacaagtacaaagatcacacaagacagagac
cggtctgttactcccaatgtttcccatgcaaatggtattcagtccttgcagcaggtttgt
caagctggaagaactgaaagtggtttgatgggccagaacaattgtgtatcacatttgcag
aagatctcaaagagtaacctacttgcgttagtgtctagttatgatgctcaatcagatacc
tataattttgacattttccaacaaacagagtacaaggtgagctgtgaaggcatggttttg
cttgcctcattactttgctcatgcatacgaagtgtcaaaaagccagagcttagaagggct
agtctcatacttctgaagatttgttctacatacatagatgatgatagtcgcttacagctg
gttattccatatgttattgcgatgctttcagatccagctgccatagtccgctgtgctgct
ttggaaactctatctgatgttctttgtcttattcaagactttcctatcagtgatgcaaag
atattcccagagtacatccttccaatgctctctttgctcccagatgatacagaggagagt
gttagggtttgctatgccagcaacatttataagttggccttgacagcctacagattcctg
cttcgttctcggagtatagaggatgctaggcctctagatgaatcaatggtagctcccaga
tcacagtctgtagaatcaccagtaaagaggcagcaagatagcattaatggtcaacttgca
cgactcagaaaatctatttatgaaatagtgcaagagttggtaatgggacagaaacagaca
cctaatgtccgcagagctcttctgcaagatataggttacctgtgttacttcttcggacat
agacaaactaacgactttcttcttcccatacttccagcatttctaaatgaccgtgatgag
cagctccgtgcagtttattttggtcagattgttgttgtgtgctattttattggttccaga
agtgtcgaggagtatctcttgccctatcttgaacaggcactaagtgatgaaatggaggtt
gtgcttgtgaaagtacttgactgcttgactatgatgtgcaaaagtggttatttgaggaaa
agggcgattgttggcctatttggaaaggctcttcccttgctgtgtcatccagtccaatgg
gttaaacggtccgctgtaagatttgttgttgcttgcagtgagagcatagggcctgtagac
acctttgtatacctttttccacatcttaagcattttttacacagggagccaccatcattg
tcatcagaaactgctcttctttcatgtattaagcctccggtctcaaaattagtcttgtac
caagctttagaggatgtccatgatgcaggagacattttactgaagggtgatggtaaaaaa
gaattgacagtgcatggaggaaggtatcctgccatggtacaaagtggttcatcaatcatg
attgaagatgattcaaggttgagaggacctaagatgtccaatgatgtgtctttgaacatt
aaagatttttcttctgctagttcagcatatataagctctgcagtacatggatctagttcc
ttttatgatggcgtacctaaaggaataccattatactccatgcaagggacagcactacat
gcaaatttgggatctgaccggcatgggagtttatcaagttcagttccaggcatacgtact
agagaaaatcatttcagtaacatgcaccgagatgggagcatcagtgactcaatgaatagc
agctcgtctataccaggtgatatcatttccaactctgataattcaggatcgttcaccaga
ccagcattgtctctggagacaagttggaaaccccgtggagttctggtggcacatcttcag
gagcatcgcttatctgtcaatgatattgctgtatcaaccgacaatacctttttcgtaaca
gcttcagatgactcaagtgtcaagatatgggatacaagaaaattggaaaaggacattgcc
ttcagatctaggttaacatatagcctcggtagtagccgagctctatgtacgacaatgctt
catggtactccccaagttattgttggtgctagtgatggaacattgcacttgttttctgtt
gactgcgcacgtggtgtagggagtgtcatcgaaaggtattctggcattgttgatgtaaaa
aggaaagatttgaaagaaggtgcaattctcagtgttgtgaactgttccacagagagtttt
agcccaaccattcttttcagcactgaacattgtggcatacataaatgggatacaaggacc
aatgctgagtcttggtcatttagatcttcaccagaggagggctatgtatcggcacttgta
gtgggccagtgcgggaattggttcatctctgggtcttcaagaggcgttcttacgttgtgg
gataataggtttttgcttcccgttaactcatggaaatatttgccagcaacccctatagag
aaattgtgcttgtttataccaccaccgaattcaatttcttcttccgggagacctgtggtt
tttgttgctgcaggctgcaatgaagttaccctatgggatgctgagaatggaagccgtcac
cagatatttagaacagcaagtactgagaatgaagctgttgtaccaaaggcaccatcaata
catccaaataccagagatgagacccggccagcgaattataattaccgaattgaagaatta
tgtgacccgcctccacgccttccaggcatccgctctttgcttcctttgccaggaggggac
ctattgaccggaggaacggacttgaagatacgctactgggatcaggccaggcctgagcaa
agcttctgtatagccggtccctcggtgaaaggagctggaaacgacgagacgtacgatata
agatccagctcttgtgtacaagttgtgcaggaaatatgcagacagcccacgacggcgtcg
aggctaacccacaagacgcagctcgccatggccgccgcggattccgcggggtgccaccga
gacgcgatcctcgcgctggcctccgtgaacttgtcgagccacaggctcatctcgggaagc
agagacggcgccgtcaaggtgtggaagtag

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