KEGG   Oryza sativa japonica (Japanese rice): 4331062
Entry
4331062           CDS       T01015                                 
Symbol
Cyclin, OsJ_08777, OsPCNA, PCNA
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03030  DNA replication
osa03410  Base excision repair
osa03420  Nucleotide excision repair
osa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    4331062 (Cyclin)
   03410 Base excision repair
    4331062 (Cyclin)
   03420 Nucleotide excision repair
    4331062 (Cyclin)
   03430 Mismatch repair
    4331062 (Cyclin)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osa03032]
    4331062 (Cyclin)
   03400 DNA repair and recombination proteins [BR:osa03400]
    4331062 (Cyclin)
DNA replication proteins [BR:osa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    4331062 (Cyclin)
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     4331062 (Cyclin)
   MMR (mismatch excision repair)
    Other MMR factors
     4331062 (Cyclin)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    4331062 (Cyclin)
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9
Other DBs
NCBI-GeneID: 4331062
NCBI-ProteinID: NP_001403947
LinkDB
Position
2:join(34848100..34848418,34848504..34848656,34848754..34848851,34849669..34849890)
AA seq 263 aa
MLELRLVQGSLLKKVLEAIRELVTDANFDCSGTGFSLQAMDSSHVALVALLLRSEGFEHY
RCDRNLSMGMNLNNMAKMLRCAGNDDIITIKADDGSDTVTFMFESPNQDKIADFEMKLMD
IDSEHLGIPDSEYQAIVRMPSSEFSRICKDLSSIGDTVIISVTKEGVKFSTAGDIGTANI
VCRQNKTVDKPEDATIIEMQEPVSLTFALRYMNSFTKASPLSEQVTISLSSELPVVVEYK
IAEMGYIRFYLAPKIEEDEEMKS
NT seq 792 nt   +upstreamnt  +downstreamnt
atgttggagctgaggcttgtgcaggggagcctgctgaagaaggtgctggaggcgatccgg
gagctggtgacggacgccaacttcgactgctcggggacggggttctcgctgcaggccatg
gattccagccacgtcgccctcgtcgcgctgctcctccgctccgaggggttcgagcactac
cgctgcgaccgcaacctctccatggggatgaacctcaacaacatggccaagatgctccgc
tgcgcgggcaacgacgacatcatcaccatcaaggccgacgatggctccgacaccgtcacc
ttcatgttcgagtcgcccaaccaagataagattgcggatttcgagatgaagctgatggac
atcgacagcgagcacctcggcatccctgactccgagtaccaggccatcgtccgcatgccg
tcctctgagttttccaggatctgcaaggatctgagcagcatcggagacactgttatcatc
tcggtgaccaaggagggtgttaagttctcgaccgctggagatattggaactgccaacatt
gtctgcaggcagaacaagactgttgacaagccagaagatgctacaatcatagagatgcag
gaaccggtgtcactaacctttgccctgaggtacatgaactccttcaccaaggcaagcccg
ctctctgaacaagttacaatcagcctttcatctgagctgccagtggtggttgagtataag
attgcagagatgggctacattagattttatctggcgccaaagattgaagaagatgaggaa
atgaagtcgtga

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