Oryza sativa japonica (Japanese rice): 4331069
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Entry
4331069 CDS
T01015
Name
(RefSeq) mRNA-decapping enzyme subunit 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4331069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4331069
Enzymes [BR:
osa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
4331069
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
4331069
mRNA degradation factors
5'-3' decay
Decapping complex
4331069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
4331069
NCBI-ProteinID:
XP_015625652
UniProt:
Q6K8F6
Q6K837
LinkDB
All DBs
Position
2:complement(join(34875486..34875667,34876041..34876108,34876275..34876378,34876962..34877114,34877578..34877676,34878025..34878152,34878255..34878406,34878529..34878614))
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AA seq
323 aa
AA seq
DB search
MAMAGGGGLNRSSSRGQLPPQELLDDLCSRFVLNVPKEDLESFERILFLLEQAHWFYEDN
SVEHNPSLKSLSFKDFTTLMFNSCAALRPYRAHLDDIYKDFTHYKFRVPVCGAIILDDTY
EKCLLVKGWKSSASWSFPRGKRSKDEEDHTCAVREVLEETGCDVSKLLKLEDYIEVSMWQ
QRVRLYIITGVKGDTVFAPQTKKEISEISWHNIDELLPAGDDAISRGVNGMKLYMVAPFL
QGLKAWIATHRHPQYQKSDTSARGTVWKAKNSSTGAAPVENPVITRTGSDPQTLDSRPGK
SFRNFRFDTASILQSMEASFLRT
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgggcggcggggggctcaaccggtcgtcgtcgagggggcagctgccgccg
caggagcttctcgacgatctctgcagccgcttcgtgctcaacgtgcccaaggaggatttg
gagtcgttcgagcggatcctgttcttgctggagcaggcgcactggttctacgaggacaac
tccgtcgagcacaacccctccctcaagtcgctctccttcaaggacttcactacgctcatg
ttcaatagctgtgctgcgctcaggccataccgcgcgcaccttgatgacatttacaaggat
ttcactcactataagttccgtgtccctgtctgcggcgccatcatcctcgatgacacctac
gagaagtgcttgcttgtgaagggatggaagtctagcgccagctggagttttcctcgtgga
aagaggagtaaagatgaagaagatcatacatgtgctgttagagaagttctagaggaaact
gggtgtgatgtttcgaagcttttaaaattggaagattatattgaagtttcaatgtggcag
caaagagtccgcctttatattataactggtgttaagggggatactgtttttgcgcctcaa
actaagaaggagatcagtgagatctcatggcacaacatcgatgaactccttcctgctggt
gatgacgcaatatctcgtggagtgaatgggatgaagctctatatggtcgcaccatttttg
cagggtctaaaagcctggatagccacacatcgtcacccacagtatcagaaatcagacacg
tctgctagaggtactgtgtggaaagcgaagaattcctcaactggagcggcgcctgttgag
aaccccgttattactagaacaggatctgacccacaaactcttgacagccgcccaggtaaa
agcttccgaaacttcaggttcgacacagcgagtatcctgcagtccatggaagcttccttc
ctacgtacctag
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