KEGG   Oryza sativa japonica (Japanese rice): 4331138
Entry
4331138           CDS       T01015                                 
Name
(RefSeq) CLIP-associated protein isoform X1
  KO
K16578  CLIP-associating protein 1/2
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4331138
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:osa04812]
    4331138
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     4331138
Cytoskeleton proteins [BR:osa04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      4331138
SSDB
Motif
Pfam: CLASP_N CEP104-like_TOG HEAT HEAT_EZ HEAT_EF3_N Cnd1 HEAT_2 XMAP215_CLASP_TOG HEAT_DAAF5 INTS1_R4 Adaptin_N Tti2 RRP12_HEAT Dopey_N
Other DBs
NCBI-GeneID: 4331138
NCBI-ProteinID: XP_015622783
LinkDB
Position
2:join(35479718..35480032,35480757..35480922,35481804..35481965,35482069..35482166,35482406..35482480,35482574..35482642,35482713..35482798,35482871..35482988,35483562..35483660,35483736..35484063,35484144..35485843,35485983..35486042,35486254..35486358,35486459..35486533,35486625..35486693,35486775..35486843,35487155..35487256,35487999..35488148)
AA seq 1281 aa
MAAASSSSASAAAVARLRELTPAPGAELSETGAAALAECCARLLISAAGGDAGAARPALD
ALCAASGEAMRRHSDELAPLVVGRLGDGDPAVRDAARRFLVRLMEMKEMNARMGNGEKTP
CISDVQDNRCMTIQIEPTDTNQAKKSPKVKIVTRDASLLAGDGDITRKSLGPIKVFSEKD
LSREIERVASTLHPDNEWAIRITAMQRVEGLVLGGAADYSAFPMLLKQLVTPLITQILDR
RSSVVKQACHLLNFLSKELLRDFEPCAELLIPVLLKNVVITIHVIAESSDNCIKEMLRNC
KVARILPKIIEFAKNDKSAVLRARCCEYAILMLELWVDTPEIQRSVDLYEEFIKCCIEDA
TSEVRSSARACYRMFSRIWPERSHQLFSSFESSRQKMINDEDAETQQRHLSPVERVKLMQ
PQSSSCNSTEIDKVVKVDSGTSFSSVDLQSVQVKASVQHDDMTSKIQPEGKTDGTTTTGS
SFKDTSTLEKETSPDKGPDPDKCDSANTAGVNLSSCDPSSATQFILEPTSELLPSDATVV
TIVQDKAECRPNTEQLTQQVQVLGHPSDLLNRSPPVSLKESGNSLKHNPIQVNFDGSSGG
KLGAQKVKHHTSAPNKSVVRKEPRNNYIPNFRRPLLSKQMTNWFYASNRSDLDDKQLILG
EMVSNMDVPSSLTEALSLGLKPKSDWMMRVYAFNFLRQSLLEQGPRGIQEVAQNFDKVMR
FVSRYLADPHHKIAQAALSSLSEIMPVFKKPFEHYLDKTLPHVFSQLNDPKESIKQQCSA
ILKLAGEIYSIDSLLPALLRTLEEQKSPKSKLAIIEFANSSFVKCTVSSDNYSSSSFLKP
WLEKLALLFKDKNSKLKEVSVAGFSSIYSHYDPASLLSFLVSLSMEEQKRLRRAIKQLIP
TIESDLEEFLQQRKHKPKVPLFDSFVGAYQPYAKGLVIKQNKHHLHATYQSDCLQADDVF
DSALHCLPRISLEVRERRAGKIESESYDESNGHDAEMMDKKSSDTRSSDPPRTFDYNVIS
DNTVESPRKEGTDIKRFEESNESELNITVRNRNVILNSCQDHGPSISRTYHQDEMSQMEE
VPEINGPSVSIKNLQQMSSSLLEMLDDPEESTRELALTLLVEILEKQRKAMENCIDTLIV
KLLHATKDAALKVVNQAHICLTTVVTQFDPLTCLRAIASQLANQDEKVLIVSINSLSKLV
IRLSQDNLMAHLSIFLPALLDAFENHSPYVRKAVVLCLVDTYLKLGPAFLPYLERLDSAQ
LQLVTTYASRLSQTSFIAVDA
NT seq 3846 nt   +upstreamnt  +downstreamnt
atggcggcggcgtcgtcgtcgtcggcgtccgccgccgcggtggcgcggctgcgggagctg
acgccggcgccgggggcggagctctcggagaccggcgcggccgcgctcgccgagtgctgc
gcgcgcctcctcatctccgccgcggggggcgacgccggggccgcgcggccggcgctcgac
gcgctgtgcgcggcgagcggggaggcgatgcggcgccactccgatgagctcgcgccgctg
gtcgtcgggcggctcggggacggcgacccggccgtgcgggacgcggccaggagattcctc
gtgcggctcatggagatgaaggagatgaatgcaaggatgggaaatggagaaaaaacccca
tgcatatcagatgtccaagacaaccgatgtatgacaatacaaattgaaccaacggatacc
aatcaagcaaagaaaagtcccaaagtgaagattgttacaagagatgcctcacttcttgca
ggagatggagatattacaagaaaatcgcttggaccaataaaggtattctctgagaaggac
ctatcaagagaaatagaaagagtagcatctactttacatccagataatgaatgggcaata
cgaataactgcaatgcaaagagtggaaggcttagttctcggaggtgctgccgactattca
gccttccctatgctcctaaagcagcttgtgaccccactcataacccagattctggatagg
agatcaagtgttgtgaaacaggcatgccatttgctaaatttcttatcaaaagaactgcta
cgtgactttgaaccgtgcgctgaactgcttattccggtccttcttaagaatgttgtgatc
actattcatgtaattgctgagtcctcggataattgtataaaagagatgctgcggaactgc
aaagtagctcgtattctaccaaaaattattgaatttgcaaagaatgataaaagtgcagtt
ctccgtgccaggtgttgtgagtacgcaatattgatgttggagttatgggttgatactcca
gaaatacagagatcagttgatctgtatgaagaattcataaaatgttgtatagaagatgca
actagtgaggtccgatcaagtgctagagcatgctacagaatgttttcaaggatttggcct
gaacgttcgcatcagttgttttcatcgtttgaatcatccaggcagaaaatgataaatgat
gaagatgctgagacacagcaaaggcatctttctcctgtagaaagagttaaattgatgcag
cctcaatctagttcttgtaattcaactgaaattgacaaagttgtcaaggtcgattctgga
acatcgttttcttctgtagaccttcaatcagtacaagtgaaagcatccgttcagcatgat
gatatgacctcaaaaattcagcctgaaggcaaaactgatggcactacaactactggaagt
tcatttaaagataccagtacgttagaaaaagaaacaagcccagacaaaggccctgatcct
gataaatgtgattcagccaatactgcaggtgtcaatttatcatcttgtgatccatcctct
gccactcaatttatactagaacctacttcagaattgctaccgtctgatgcaactgttgta
acaattgttcaagacaaggctgaatgcaggccaaatactgaacagctgactcagcaagtt
caagttttgggacatccttctgatctgctgaaccgttcacctcctgttagtttgaaagaa
tcaggaaactcgctgaaacataaccctattcaagtgaactttgatggtagctcaggtgga
aaactaggagctcagaaagtgaagcatcatactagcgctcctaataagagtgttgttcgt
aaggagccgcggaacaattacattcccaacttccggcgtcctctcttgagtaagcagatg
acaaactggttttatgccagtaacagaagtgatttagatgacaagcaactcattttgggt
gaaatggtcagcaacatggatgtgccctcctctctcaccgaggcactttctttgggtctt
aaaccaaagtcagattggatgatgagggtatacgcattcaatttcttaagacaatctttg
ctagagcagggaccaagaggcattcaggaggttgcacaaaattttgacaaggttatgagg
tttgttagtcgttacctggctgatcctcatcataaaatagcacaggctgctctctcatca
ctttcagagatcatgccagtttttaagaagccttttgaacattatctggacaagactctg
cctcatgttttctctcagctgaatgatccaaaggaatccatcaagcagcagtgctcagca
attttgaaacttgcaggtgaaatctattccattgattcgctcttaccggccctacttcgt
acactagaagaacagaaatctcccaagtcaaaattggcaattattgagtttgcaaactct
tcttttgtaaaatgcacagtcagttctgacaactattctagcagcagcttccttaagcca
tggcttgaaaagctagctcttttgttcaaggacaaaaacagtaagctaaaagaggttagc
gttgctggtttctcatcaatctattctcactacgatcctgcatctttgttaagctttcta
gttagcttgtcaatggaagaacaaaagagattaagacgggcaataaagcagttgatccct
acaatagagagcgacttggaagagtttttgcaacaaaggaaacataagccaaaggtgcca
ctatttgattcttttgttggtgcatatcaaccttatgctaaaggtttagtcataaagcaa
aataagcaccatctgcatgccacatatcagtctgattgccttcaggctgatgatgtgttc
gattctgcactccactgtctcccaagaatttctttggaagttcgtgagcgacgcgctggg
aaaattgaatctgaatcttacgatgaatctaatggtcatgatgctgaaatgatggacaag
aaatctagtgatacaaggtcgagtgacccccctagaacatttgattataatgtgatatca
gataacacagttgagagtccaagaaaagagggtactgacatcaagagatttgaggaatca
aacgagagtgaactgaacataactgtcagaaataggaatgtcatattgaatagctgtcaa
gatcatggaccaagcatttccaggacatatcatcaggatgaaatgagtcaaatggaagaa
gttccagagataaatggcccttccgtgtcaatcaagaatttacaacagatgtcctcttct
ctacttgagatgcttgatgatccagaggaatccaccagagagcttgcacttactctattg
gttgaaattcttgaaaagcaacgaaaggcaatggagaactgtatcgatactcttatagtt
aaattgctgcatgcaaccaaagatgctgccttgaaggttgtaaatcaagcccatatctgt
ttgacaacggtggttactcaatttgatccgctgacatgcctaagagcaattgcttctcag
ttggccaaccaggatgaaaaagttcttattgtcagcatcaacagtttgagcaagcttgtt
attcgattatcacaggacaatcttatggcacatttgtcgatatttcttcctgcactcctg
gacgccttcgaaaaccatagtccatatgtccgcaaggctgtggtgttgtgcttggtggat
acgtacctgaagctcgggccagcgttcttgccgtatttggagaggctggacagcgcccag
ctgcagctggtaaccacgtacgccagcaggctgtcccagacgagctttattgctgtggac
gcttga

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