Oryza sativa japonica (Japanese rice): 4331172
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Entry
4331172 CDS
T01015
Name
(RefSeq) bet1-like SNARE 1-1 isoform X1
KO
K08504
blocked early in transport 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4331172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4331172
Membrane trafficking [BR:
osa04131
]
SNARE
SNAP-25[C] (Qc)
Bet1
4331172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
MafB
Motif
Other DBs
NCBI-GeneID:
4331172
NCBI-ProteinID:
XP_015626198
UniProt:
Q6K710
Q6KA19
LinkDB
All DBs
Position
2:join(35733274..35733287,35734961..35735108,35735971..35736027,35736114..35736173,35736257..35736346)
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AA seq
122 aa
AA seq
DB search
MNSRSNYRSTRTSLFDGIEEGRIRATSYSSHEIDENENDQAIDGLQDRVSILKRLSGDIH
EEVETHNRMLDRMGNDMDSSRGFLSGTVDKFKMVFETKSSRRMGTLVASFVALFLLVYYL
TR
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgagaagcaactaccgcagcaccagaacttctctttttgatggcattgaggag
ggcagaatccgtgcaacatcctattcttcacatgagatagatgagaatgagaatgatcaa
gctattgatggattgcaggatcgagtcagcattctcaagcggttgtctggtgatatccat
gaagaggtggaaactcataaccgtatgctagaccgaatgggcaatgatatggattcgtca
aggggttttctgtctggaacagtggacaagttcaagatggtttttgagaccaaatcaagt
cggaggatgggaaccctcgtagcatcattcgttgcgctttttctgctggtatactacttg
accaggtag
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